TADB
Clostridium thermocellum ATCC 27405 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3843301
Link to NCBI Taxonomy Browser by Tax_id :203119
 
# TA INFO in replicon: NC_009012
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Cthe_1463 Cthe_1462 - 1782208..1782895 relBE */Xre-RelE
2 2 Cthe_1620 Cthe_1619 - 1951335..1952008 vapBC */AbrB-PIN
3 2 Cthe_1746 Cthe_1745 - 2065083..2066308 -/Xre-COG2856
4 2 Cthe_2459 Cthe_2460 - 2933630..2934514 -/Xre-COG2856
5 2 Cthe_2462 Cthe_2461 - 2934642..2935646 -/Xre-Bro
6 2 Cthe_2699 Cthe_2698 - 3184869..3185496 mazEF, ccd or relBE */RHH-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Cthe_1619AbrB/SpoVT_AbrB84.94Cthe_1620PIN/COG184886.08NC_009012
2Cthe_2700-60.35Cthe_2699PemK/MazF76.08NC_009012
3Cthe_1744-62.42Cthe_1745HTH_XRE/HTH_XRE/HTH_3/HipB74.97NC_009012
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.