TADB
Clostridium difficile 630, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4290252
Link to NCBI Taxonomy Browser by Tax_id :272563
 
# TA INFO in replicon: NC_009089
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 CD630_13590 CD630_13600 - 1574593..1575501 -/Xre-COG2856
2 2 CD630_29510 CD630_29500 - 3426490..3427436 -/Xre-COG2856
3 2 CD630_31550 CD630_31540 - 3683521..3684856 -/Xre-Fic
4 2 CD630_34610 CD630_34620 - 4054871..4055510 mazEF, ccd or relBE */RHH-MazF
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1CD1361-60.29CD1360AHTH_XRE/HTH_XRE/HTH_3/HipB72.46NC_009089
2CD3570A-60.74CD3571VapI70.53NC_009089
3CD1378B-64.19CD1378AHTH_XRE/HTH_XRE/HTH_3/VapI72.28NC_009089
4CD1756-60.97CD1755AHTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.18NC_009089
5CD0641-64CD0642HTH_XRE/HTH_XRE/HTH_3/VapI/HipB74.56NC_009089
6CD0912-63.9CD0911HTH_XRE/HTH_XRE/HTH_3/VapI72.5NC_009089
7CD3140-60.58CD3139HTH_XRE/HTH_XRE/HTH_3/VapI/HipB73.73NC_009089
8CD2292-63.23CD2291HTH_XRE/HTH_XRE/HTH_3/VapI/HipB76.43NC_009089
9CD2307-62.71CD2308HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.23NC_009089
10CD0369-65.68CD0370HTH_XRE/HTH_XRE/HTH_3/HipB78.68NC_009089
11CD2044-60.68CD2045HTH_XRE/HTH_XRE/HTH_376.59NC_009089
12CD2214HTH_XRE/HTH_XRE/HTH_3/HipB86.76CD2215HTH_XRE/HTH_XRE/HTH_3/HipB87.15NC_009089
13CD3462-64.23CD3461PemK/MazF75.75NC_009089
14CD1127-61.52CD1126AHTH_XRE/HTH_XRE/HTH_3/VapI/HipB75.48NC_009089
15CD3152-64.64CD3152AHTH_XRE/HTH_XRE/HTH_3/HipB73.01NC_009089
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.