TADB
Saccharopolyspora erythraea NRRL 2338 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 8212805
Link to NCBI Taxonomy Browser by Tax_id :405948
 
# TA INFO in replicon: NC_009142
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SACE_0169 SACE_0170 - 196982..197879 -/Xre-DUF397
2 2 SACE_0267 SACE_0268 - 302802..303844 -/Xre-DUF397
3 2 SACE_0301 SACE_0300 - 336341..337376 -/Xre-DUF397
4 2 SACE_0865 SACE_0864 - 967187..968244 -/Xre-DUF397
5 2 SACE_1220 SACE_1219 - 1340551..1341573 -/Xre-DUF397
6 2 SACE_1313 SACE_1314 - 1448554..1449118 mazEF, ccd or relBE */RHH-MazF
7 2 SACE_1379 SACE_1378 - 1525178..1526199 -/Xre-DUF397
8 2 SACE_1545 SACE_1546 - 1694161..1695194 -/Xre-DUF397
9 2 SACE_1896 SACE_1895 - 2070858..2071928 -/Xre-DUF397
10 2 SACE_2221 SACE_2220 - 2410447..2411593 -/Xre-DUF397
11 2 SACE_3170 SACE_3169 - 3498382..3499424 -/Xre-COG2856
12 2 SACE_3347 SACE_3348 - 3700064..3700576 -/Xre-DUF397
13 2 SACE_3664 SACE_3663 - 4021551..4022620 -/Xre-DUF397
14 2 SACE_3734 SACE_3733 - 4086770..4087587 -/Xre-DUF397
15 2 SACE_3780 SACE_3779 - 4135125..4135981 -/ArsR-COG3832
16 2 SACE_4816 SACE_4815 - 5379482..5380515 -/Xre-COG2856
17 2 SACE_5304 SACE_5305 - 5930742..5931821 -/Xre-DUF397
18 2 SACE_5411 SACE_5410 - 6053242..6054284 -/Xre-DUF397
19 2 SACE_5625 SACE_5626 - 6321359..6322396 -/Xre-DUF397
20 2 SACE_5740 SACE_5739 - 6447924..6449011 -/Xre-DUF397
21 2 SACE_5772 SACE_5771 - 6483653..6484469 -/ArsR-COG3832
22 2 SACE_5826 SACE_5827 - 6539271..6539911 vapBC */RHH-PIN
23 2 SACE_5846 SACE_5847 - 6562220..6563264 -/Xre-DUF397
24 2 SACE_6153 SACE_6152 - 6899399..6900168 -/ArsR-COG3832
25 2 SACE_6212 SACE_6211 - 6961809..6962823 -/Xre-DUF397
26 2 SACE_6555 SACE_6556 - 7349330..7349931 phd-doc */RHH-Fic
27 2 SACE_6608 SACE_6607 - 7405105..7406341 -/Xre-DUF397
28 2 SACE_6741 SACE_6742 - 7551391..7552402 -/Xre-DUF397
29 2 SACE_7129 SACE_7130 - 7931073..7932136 -/Xre-DUF397
30 2 SACE_7307 SACE_7306 - 8112691..8113492 -/ArsR-COG3832
31 2 SACE_7313 SACE_7314 - 8117189..8118033 -/ArsR-COG3832

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SACE_1314HTH_4/COG360987.04SACE_1313MazF/PemK88.9NC_009142
2SACE_6738-63.55SACE_6739VapC/PIN/COG184872.17NC_009142
3SACE_0246-64SACE_0245HTH_XRE/HTH_XRE/HTH_372.19NC_009142
4SACE_5827-65.26SACE_5826COG4113/PIN72.65NC_009142
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.