TADB
Desulfotomaculum reducens MI-1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3608104
Link to NCBI Taxonomy Browser by Tax_id :349161
 
# TA INFO in replicon: NC_009253
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Dred_0019 Dred_0020 - 27993..28809 -/Xre-COG2856
2 2 Dred_0029 Dred_0030 - 38097..39514 ygiT-mqsR (relBE) */Xre-YgiU
3 2 Dred_0494 Dred_0495 - 536291..537033 -/Xre-COG2856
4 2 Dred_0500 Dred_0499 - 539310..540040 -/HEPN-MNT
5 2 Dred_0525 Dred_0524 - 567044..567795 -/HEPN-MNT(antitoxin)
6 2 Dred_0524 Dred_0525 - 567044..567795 -/HEPN-MNT
7 2 Dred_0897 Dred_0896 - 956206..956942 -/HEPN-MNT
8 2 Dred_0915 Dred_0916 - 976082..977474 -/Xre-COG2856
9 2 Dred_2422 Dred_2423 - 2640447..2641254 -/HEPN-MNT
10 2 Dred_2426 Dred_2425 - 2642141..2642826 vapBC */AbrB-PIN
11 2 Dred_2427 Dred_2428 - 2643102..2643723 hicBA */HicB-HicA
12 2 Dred_2467 Dred_2468 - 2688480..2689092 relBE or parDE */PHD-RelE
13 2 Dred_2622 Dred_2623 - 2846077..2847083 -/Xre-Bro
14 2 Dred_2894 Dred_2895 - 3140575..3141208 mazEF, ccd or relBE */RHH-MazF
15 2 Dred_3007 Dred_3006 - 3268499..3269124 phd-doc */PHD-Fic
16 2 Dred_3011 Dred_3012 - 3272364..3273052 -/HEPN-MNT
17 2 Dred_3117 Dred_3118 - 3394914..3395581 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Dred_2895HTH_4/COG360988.86Dred_2894PemK/MazF88.99NC_009253
2Dred_2425AbrB/SpoVT_AbrB86.42Dred_2426PIN/COG1848/VapC/COG411386.84NC_009253
3Dred_1765Plasmid_killer61.64Dred_1764SpoVT_AbrB86.31NC_009253
4Dred_0918-68.26Dred_0917HTH_XRE/HTH_XRE/HTH_3/HipB77.21NC_009253
5Dred_1232-67.9Dred_1231HTH_XRE/HTH_3/HTH_XRE/HipB74NC_009253
6Dred_0753-62.55Dred_0752HTH_XRE/HTH_XRE/HTH_3/HipB/VapI73.91NC_009253
7Dred_0591-60.52Dred_0590HTH_XRE/HTH_3/HTH_XRE/HipB/VapI72.55NC_009253
8Dred_0997-62.64Dred_0996HTH_XRE/HTH_XRE/HTH_XRE/HTH_XRE/HTH_3/HTH_3/HipB/HipB71.64NC_009253
9Dred_1341-62.9Dred_1340VapI/HTH_XRE70.65NC_009253
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.