TADB
Shewanella putrefaciens CN-32 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4659220
Link to NCBI Taxonomy Browser by Tax_id :319224
 
# TA INFO in replicon: NC_009438
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Sputcn32_0176 Sputcn32_0177 - 201597..202203 relBE or parDE */PHD-RelE
2 2 Sputcn32_0181 Sputcn32_0182 - 205738..206357 relBE */Xre-RelE
3 2 Sputcn32_0191 Sputcn32_0190 - 212216..212787 relBE or parDE */PHD-RelE
4 2 Sputcn32_0428 Sputcn32_0429 - 463101..463651 relBE or parDE */PHD-RelE
5 2 Sputcn32_1986 Sputcn32_1985 - 2272473..2273318 -/RHH-GNAT
6 2 Sputcn32_1990 Sputcn32_1991 - 2278872..2279443 relBE or parDE */PHD-RelE
7 2 Sputcn32_2916 Sputcn32_2915 - 3380465..3382266 hipBA */Xre-HipA
8 2 Sputcn32_3514 Sputcn32_3515 - 4088825..4089390 -/-
9 2 Sputcn32_3528 Sputcn32_3529 - 4101638..4103330 -/-
10 2 Sputcn32_3625 Sputcn32_3624 - 4223800..4225302 -/Xre-Fic

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Sputcn32_0190StbD/Phd87.56Sputcn32_0191ParE/Plasmid_stabil90NC_009438
2Sputcn32_1991StbD/Phd87.56Sputcn32_1990ParE/Plasmid_stabil90NC_009438
3Sputcn32_3515HTH_490.39Sputcn32_3514Plasmid_stabil/ParE91.41NC_009438
4Sputcn32_1879-64.19Sputcn32_1878HTH_472.85NC_009438
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.