TADB
Pelotomaculum thermopropionicum SI chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3025375
Link to NCBI Taxonomy Browser by Tax_id :370438
 
# TA INFO in replicon: NC_009454
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 PTH_0023 PTH_0024 - 26544..27190 -/HEPN-MNT
2 2 PTH_0033 PTH_0034 - 35427..36061 relBE */AbrB-RelE
3 2 PTH_0136 PTH_0137 - 125991..126564 -/HEPN-MNT
4 2 PTH_0364 PTH_0363 - 351553..352198 vapBC */AbrB-PIN
5 2 PTH_0397 PTH_0396 - 382541..383076 relBE */AbrB-RelE
6 2 PTH_0403 PTH_0402 - 385910..386598 vapBC */PHD-PIN
7 2 PTH_0411 PTH_0412 - 396051..396771 vapBC */AbrB-PIN
8 2 PTH_0436 PTH_0437 - 418330..419258 -/HEPN-MNT
9 2 PTH_0499 PTH_0500 - 484439..485010 vapBC */AbrB-PIN
10 2 PTH_0694 PTH_0695 - 688704..689583 vapBC */COG2886-PIN
11 2 PTH_0703 PTH_0702 - 696525..697158 vapBC */AbrB-PIN
12 2 PTH_0738 PTH_0737 - 745385..746013 mazEF, ccd or relBE */RHH-MazF
13 2 PTH_0936 PTH_0935 - 957099..957722 hicBA */HicB-HicA
14 2 PTH_2107 PTH_2106 - 2215279..2216143 -/HEPN-MNT
15 2 PTH_2303 PTH_2304 - 2408426..2409089 vapBC */RHH-PIN
16 2 PTH_2443 PTH_2444 - 2564334..2564999 relBE */Xre-RelE
17 2 PTH_2501 PTH_2500 - 2606290..2606981 hicBA */HicB-HicA
18 2 PTH_2549 PTH_2550 - 2654745..2655471 vapBC */PHD-PIN
19 2 PTH_2560 PTH_2561 - 2662227..2662858 vapBC */AbrB-PIN
20 2 PTH_2584 PTH_2585 - 2692004..2692829 -/HEPN-MNT
21 2 PTH_2698 PTH_2699 - 2801404..2802059 vapBC */RHH-PIN
22 2 PTH_2783 PTH_2784 - 2884685..2885331 vapBC */RHH-PIN
23 2 PTH_2792 PTH_2791 - 2894056..2894705 vapBC */RHH-PIN
24 2 PTH_2796 PTH_2795 - 2896804..2897521 vapBC */AbrB-PIN
25 2 PTH_2807 PTH_2808 - 2914847..2915507 vapBC */RHH-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1PTH_0737HTH_4/COG360985.85PTH_0738PemK/MazF88.54NC_009454
2PTH_0935COG159884PTH_0936COG172485.35NC_009454
3PTH_2796VapC/PIN/COG184870.36PTH_0412AbrB/SpoVT_AbrB86.84NC_009454
4PTH_0499PIN/COG4113/COG1848/VapC86.4PTH_0412AbrB/SpoVT_AbrB86.84NC_009454
5PTH_2163-61.64PTH_2162HTH_XRE/HTH_XRE/HTH_3/HipB/VapI71.58NC_009454
6PTH_0363AbrB/SpoVT_AbrB86.1PTH_0364COG1848/PIN/COG4113/VapC86.23NC_009454
7PTH_0034SpoVT_AbrB83.19PTH_0033RelE91.93NC_009454
8PTH_2561-61.52PTH_2560COG1848/PIN/VapC71.94NC_009454
9PTH_2499HTH_XRE/HTH_3/HTH_XRE/VapI/HipB82.46PTH_2498Phd82.72NC_009454
10PTH_2699-67.55PTH_2698COG1848/PIN71.97NC_009454
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.