TADB
Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. plasmid pSWIT01

# GENOME INFO
Genome size (bp) : 310228
Link to NCBI Taxonomy Browser by Tax_id :392499
 
# TA INFO in replicon: NC_009507
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Swit_5117 Swit_5118 - 3043..3577 RelBE or parDE */RHH-RelE
2 2 Swit_5181 Swit_5182 - 73105..73796 vapBC */PHD-PIN
3 2 Swit_5216 Swit_5217 - 106968..108599 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Swit_5393-63.61Swit_5392HTH_XRE/HTH_3/HipB/HTH_XRE72.66NC_009507
2Swit_5182StbD90.35Swit_5183-64.03NC_009507
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.