TADB
Mycobacterium tuberculosis H37Ra chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4419977
Link to NCBI Taxonomy Browser by Tax_id :419947
 
# TA INFO in replicon: NC_009525
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 MRA_0249 MRA_0248 - 290466..291144 vapBC */RHH-PIN
2 2 MRA_0285 MRA_0286 - 334070..334704 vapBC */RHH-PIN
3 2 MRA_0308 MRA_0307 - 364614..365140 mazEF, ccd or relBE */RHH-MazF
4 2 MRA_0310 MRA_0309 - 365188..365831 vapBC */RHH-PIN
5 2 MRA_0556 MRA_0557 - 641538..642214 vapBC */RHH-PIN
6 2 MRA_0603 MRA_0604 - 696149..696795 vapBC */PHD-PIN
7 2 MRA_0606 MRA_0607 - 698464..699110 vapBC */AbrB-PIN
8 2 MRA_0616 MRA_0615 - 704554..705197 vapBC */RHH-PIN
9 2 MRA_0633 MRA_0632 - 717720..718369 vapBC */RHH-PIN
10 2 MRA_0636 MRA_0635 - 719335..719999 vapBC */PHD-PIN
11 2 MRA_0667 MRA_0667A - 754290..754923 vapBC */RHH-PIN
12 2 MRA_0669 MRA_0670 - 755991..756531 mazEF, ccd or relBE */RHH-MazF
13 2 MRA_0671 MRA_0672 - 756641..757443 vapBC */RHH-PIN
14 2 MRA_0757 MRA_0756 - 842253..842962 vapBC */RHH-PIN
15 2 MRA_0927 MRA_0926 - 1025519..1026492 -/RHH-GNAT
16 2 MRA_1124 MRA_1123A - 1240726..1241294 vapBC */RHH-PIN
17 2 MRA_1251 MRA_1250 - 1385588..1386276 vapBC */RHH-PIN
18 2 MRA_1255 MRA_1255A - 1389995..1390554 relBE or parDE */PHD-RelE
19 2 MRA_1406 MRA_1407 - 1575422..1576077 vapBC */RHH-PIN
20 2 MRA_1573 MRA_1572 - 1766272..1766900 vapBC */RHH-PIN
21 2 MRA_1730 MRA_1731 - 1948548..1949161 vapBC */RHH-PIN
22 2 MRA_1752 MRA_1751 - 1969223..1969683 vapBC */RHH-PIN
23 2 MRA_1849 MRA_1850 - 2097189..2097844 vapBC */RHH-PIN
24 2 MRA_1963 MRA_1962 - 2210625..2211148 vapBC */RHH-PIN
25 2 MRA_1964 MRA_1965 - 2211483..2212486 relBE */Xre-RelE
26 2 MRA_1968 MRA_1969 - 2213580..2214124 RelBE or parDE */RHH-RelE
27 2 MRA_1971 MRA_1972 - 2214765..2215448 vapBC */PHD-PIN
28 2 MRA_1993 MRA_1994 - 2235313..2236001 vapBC */RHH-PIN
29 2 MRA_2003 MRA_2004 - 2242639..2243537 -/COG5642-COG5654
30 2 MRA_2006 MRA_2007 - 2244205..2244791 mazEF, ccd or relBE */RHH-MazF
31 2 MRA_2026 MRA_2025 - 2267930..2268571 vapBC */RHH-PIN
32 2 MRA_2035 MRA_2034 - 2275180..2276305 -/COG2442-PIN
33 2 MRA_2038 MRA_2037 - 2276705..2277624 relBE */Xre-RelE
34 2 MRA_2050 MRA_2049 - 2291194..2292002 -/ArsR-COG3832
35 2 MRA_2077 MRA_2076 - 2330731..2331367 mazEF, ccd or relBE */RHH-MazF
36 2 MRA_2117 MRA_2118 - 2373988..2374683 vapBC */RHH-PIN
37 2 MRA_2520 MRA_2519 - 2820051..2820703 vapBC */RHH-PIN
38 2 MRA_2554 MRA_2553 - 2863059..2863684 vapBC */RHH-PIN
39 2 MRA_2557 MRA_2558 - 2866235..2866875 vapBC */RHH-PIN
40 2 MRA_2574 MRA_2573 - 2879751..2880535 vapBC */RHH-PIN
41 2 MRA_2576 MRA_2575 - 2880574..2881205 vapBC */RHH-PIN
42 2 MRA_2578 MRA_2579 - 2881695..2882332 vapBC */RHH-PIN
43 2 MRA_2624 MRA_2623A - 2937460..2938106 vapBC */AbrB-PIN
44 2 MRA_2630 MRA_2629A - 2942038..2942752 vapBC */RHH-PIN
45 2 MRA_2782 MRA_2783 - 3082138..3082817 vapBC */RHH-PIN
46 2 MRA_2784 MRA_2785 - 3082843..3083504 vapBC */RHH-PIN
47 2 MRA_2891 MRA_2890 - 3189529..3190077 relBE or parDE */PHD-RelE
48 2 MRA_2896 MRA_2895A - 3195130..3195817 vapBC */RHH-PIN
49 2 MRA_3214 MRA_3215 - 3561410..3562299 vapBC */PHD-PIN
50 2 MRA_3216 MRA_3217 - 3562530..3563200 relBE */Xre-RelE
51 2 MRA_3221 MRA_3220 - 3565096..3566060 -/Xre-COG5654
52 2 MRA_3362 MRA_3363 - 3718483..3719157 vapBC */RHH-PIN
53 2 MRA_3398 MRA_3397 - 3779887..3780416 relBE or parDE */PHD-RelE
54 2 MRA_3424 MRA_3425 - 3808366..3809066 vapBC */PHD-PIN
55 2 MRA_3448 MRA_3447 - 3834930..3835636 vapBC */PHD-PIN
56 2 MRA_3732 MRA_3733 - 4148251..4148909 vapBC */RHH-PIN
57 2 MRA_3787 MRA_3788 - 4206074..4207043 -/MerR-PIN

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1MRA_0967-67.1MRA_0968COG4113/PIN73.33NC_009525
2MRA_2519-64.19MRA_2520COG184870.6NC_009525
3MRA_0670-65MRA_0669PemK/MazF73.6NC_009525
4MRA_1123A-67.1MRA_1124VapC/PIN/COG184873.44NC_009525
5MRA_1731-62.68MRA_1730COG4113/PIN74.13NC_009525
6MRA_0675-67.1MRA_0674VapC/PIN73.03NC_009525
7MRA_1407HTH_487.15MRA_1406VapC/PIN/COG184887.18NC_009525
8MRA_0248-67.16MRA_0249COG1848/PIN71.27NC_009525
9MRA_2118-67.97MRA_2117COG1848/PIN/VapC71.52NC_009525
10MRA_2553-64.87MRA_2554VapC/PIN74.75NC_009525
11MRA_2783-63.06MRA_2782VapC/PIN/COG184873.22NC_009525
12MRA_0286-61.26MRA_0285COG1848/PIN/VapC70.9NC_009525
13MRA_1572-63.81MRA_1573PIN/VapC/COG184873.74NC_009525
14MRA_2007HTH_486.9MRA_2006PemK/MazF88.67NC_009525
15MRA_2025-60.97MRA_2026PIN/VapC/COG184874.85NC_009525
16MRA_2895AHTH_463.14MRA_2896COG1848/PIN84.16NC_009525
17MRA_1250-64.13MRA_1251COG1848/PIN70.73NC_009525
18MRA_2542HTH_3/HTH_XRE/HTH_XRE/HipB63.05MRA_2541VapC/PIN83.69NC_009525
19MRA_2575HTH_486.05MRA_2576VapC/PIN/COG184886.81NC_009525
20MRA_1850-67.68MRA_1849COG1848/PIN73.62NC_009525
21MRA_2575HTH_486.05MRA_2574VapC/PIN86.5NC_009525
22MRA_1114COG3609/HTH_483.47MRA_1113PemK/MazF88.14NC_009525
23MRA_1953-60.58MRA_1952PemK/MazF75.18NC_009525
24MRA_1969COG360988.69MRA_1968Plasmid_stabil/ParE92.63NC_009525
25MRA_0309HTH_483.65MRA_0310VapC/PIN/COG184885.16NC_009525
26MRA_2036-62.64MRA_2037HTH_XRE/HTH_XRE/HTH_3/HipB72.56NC_009525
27MRA_1504-61MRA_1505PemK/MazF76.27NC_009525
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.