TADB
Mycobacterium tuberculosis F11 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4424435
Link to NCBI Taxonomy Browser by Tax_id :336982
 
# TA INFO in replicon: NC_009565
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 TBFG_10243 TBFG_10242 - 289422..290100 vapBC */RHH-PIN
2 2 TBFG_10281 TBFG_10282 - 333025..333650 vapBC */RHH-PIN
3 2 TBFG_10306 TBFG_10305 - 366393..366919 mazEF, ccd or relBE */RHH-MazF
4 2 TBFG_10593 TBFG_10592 - 680938..681557 vapBC */RHH-PIN
5 2 TBFG_10607 TBFG_10608 - 698067..698713 vapBC */PHD-PIN
6 2 TBFG_10610 TBFG_10611 - 700382..701028 vapBC */AbrB-PIN
7 2 TBFG_10620 TBFG_10619 - 706472..707115 vapBC */RHH-PIN
8 2 TBFG_10635 TBFG_10634 - 719638..720287 vapBC */RHH-PIN
9 2 TBFG_10638 TBFG_10637 - 721253..721917 vapBC */PHD-PIN
10 2 TBFG_10669 TBFG_10670 - 756745..757378 vapBC */RHH-PIN
11 2 TBFG_10672 TBFG_10673 - 758446..758986 mazEF, ccd or relBE */RHH-MazF
12 2 TBFG_10674 TBFG_10675 - 759096..759898 vapBC */RHH-PIN
13 2 TBFG_10763 TBFG_10762 - 844816..845525 vapBC */RHH-PIN
14 2 TBFG_10937 TBFG_10936 - 1028037..1029010 -/RHH-GNAT
15 2 TBFG_11136 TBFG_11135 - 1243183..1243751 vapBC */RHH-PIN
16 2 TBFG_11267 TBFG_11266 - 1388044..1388732 vapBC */RHH-PIN
17 2 TBFG_11272 TBFG_11273 - 1392452..1393011 relBE or parDE */PHD-RelE
18 2 TBFG_11426 TBFG_11427 - 1578453..1579108 vapBC */RHH-PIN
19 2 TBFG_11593 TBFG_11592 - 1769393..1770021 vapBC */RHH-PIN
20 2 TBFG_11759 TBFG_11758 - 1964405..1964865 vapBC */RHH-PIN
21 2 TBFG_11982 TBFG_11981 - 2208981..2209504 vapBC */RHH-PIN
22 2 TBFG_11983 TBFG_11984 - 2209839..2210842 relBE */Xre-RelE
23 2 TBFG_11987 TBFG_11988 - 2211936..2212480 RelBE or parDE */RHH-RelE
24 2 TBFG_11990 TBFG_11991 - 2213121..2213804 vapBC */PHD-PIN
25 2 TBFG_12020 TBFG_12021 - 2240993..2241891 -/COG5642-COG5654
26 2 TBFG_12042 TBFG_12041 - 2266284..2266925 vapBC */RHH-PIN
27 2 TBFG_12054 TBFG_12053 - 2274892..2276017 -/COG2442-PIN
28 2 TBFG_12057 TBFG_12056 - 2276417..2277336 relBE */Xre-RelE
29 2 TBFG_12072 TBFG_12071 - 2295759..2296714 -/ArsR-COG3832
30 2 TBFG_12137 TBFG_12138 - 2380122..2380817 vapBC */RHH-PIN
31 2 TBFG_12566 TBFG_12565 - 2881101..2881885 vapBC */RHH-PIN
32 2 TBFG_12568 TBFG_12567 - 2881924..2882555 vapBC */RHH-PIN
33 2 TBFG_12570 TBFG_12571 - 2883045..2883682 vapBC */RHH-PIN
34 2 TBFG_12770 TBFG_12771 - 3082125..3082804 vapBC */RHH-PIN
35 2 TBFG_12772 TBFG_12773 - 3082830..3083491 vapBC */RHH-PIN
36 2 TBFG_12814 TBFG_12815 - 3122122..3122692 mazEF, ccd or relBE */RHH-MazF
37 2 TBFG_12818 TBFG_12817 - 3123777..3124749 -/RHH-GNAT
38 2 TBFG_12844 TBFG_12845 - 3148258..3148862 vapBC */PHD-PIN
39 2 TBFG_12882 TBFG_12881 - 3189067..3189615 relBE or parDE */PHD-RelE
40 2 TBFG_13202 TBFG_13203 - 3562377..3563266 vapBC */PHD-PIN
41 2 TBFG_13204 TBFG_13205 - 3563497..3564167 relBE */Xre-RelE
42 2 TBFG_13209 TBFG_13208 - 3566063..3567027 -/Xre-COG5654
43 2 TBFG_13351 TBFG_13352 - 3719299..3719973 vapBC */RHH-PIN
44 2 TBFG_13394 TBFG_13393 - 3783239..3783768 relBE or parDE */PHD-RelE
45 2 TBFG_13418 TBFG_13419 - 3810360..3811060 vapBC */PHD-PIN
46 2 TBFG_13781 TBFG_13782 - 4210630..4211599 -/MerR-PIN

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1TBFG_11972-60.58TBFG_11971PemK/MazF75.18NC_009565
2TBFG_10673-65TBFG_10672PemK/MazF73.6NC_009565
3TBFG_10282-61.26TBFG_10281COG1848/PIN/VapC70.9NC_009565
4TBFG_12567HTH_486.05TBFG_12566VapC/PIN86.5NC_009565
5TBFG_11135-67.1TBFG_11136VapC/PIN/COG184873.44NC_009565
6TBFG_11427HTH_487.15TBFG_11426VapC/PIN/COG184887.18NC_009565
7TBFG_12771-63.06TBFG_12770VapC/PIN/COG184873.22NC_009565
8TBFG_12138-67.97TBFG_12137COG1848/PIN/VapC71.52NC_009565
9TBFG_11124COG3609/HTH_483.47TBFG_11123PemK/MazF88.14NC_009565
10TBFG_11266-64.13TBFG_11267COG1848/PIN70.73NC_009565
11TBFG_12041-60.97TBFG_12042PIN/VapC/COG184874.85NC_009565
12TBFG_10678VapC/PIN73.03TBFG_10680-62.68NC_009565
13TBFG_12815-67.1TBFG_12814PemK/MazF76.07NC_009565
14TBFG_10679-67.1TBFG_10678VapC/PIN73.03NC_009565
15TBFG_11592-63.81TBFG_11593PIN/VapC/COG184873.74NC_009565
16TBFG_10242-67.16TBFG_10243COG1848/PIN71.27NC_009565
17TBFG_12567HTH_486.05TBFG_12568VapC/PIN/COG184886.81NC_009565
18TBFG_11524-61TBFG_11525PemK/MazF76.27NC_009565
19TBFG_12537HTH_3/HTH_XRE/HTH_XRE/HipB63.05TBFG_12536VapC/PIN83.69NC_009565
20TBFG_11988COG360988.69TBFG_11987Plasmid_stabil/ParE92.63NC_009565
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.