TADB
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, chromosome

# GENOME INFO
Genome size (bp) : 5315120
Link to NCBI Taxonomy Browser by Tax_id :272620
 
# TA INFO in replicon: NC_009648
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 KPN_00619 KPN_00618 - 700967..701648 relBE */Xre-RelE
2 2 KPN_01668 KPN_01667 - 1843045..1844654 hipBA */Xre-HipA
3 2 KPN_03747 KPN_03748 - 4090625..4091384 -/YhfG-Fic
4 2 KPN_03814 KPN_03815 - 4170034..4170620 phd-doc */PHD-Fic
5 2 KPN_04066 KPN_04067 - 4454925..4455624 relBE */Xre-RelE
6 2 KPN_04186 KPN_04185 - 4585664..4586295 vapBC */RHH-PIN
7 2 KPN_04644 KPN_04643 - 5073423..5073939 RelBE or parDE */RHH-RelE
8 2 KPN_04693 KPN_04692 - 5131491..5132260 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1KPN_00618HTH_XRE/HTH_3/HTH_XRE/HipB83.58KPN_00619RelE89.04NC_009648
2KPN_04643RelB90.44KPN_04644RelE93.71NC_009648
3KPN_02748HTH_XRE85.42KPN_02749HTH_XRE86NC_009648
4KPN_04693HipA80.16KPN_04694-63.06NC_009648
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.