TADB
Marinomonas sp. MWYL1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5100344
Link to NCBI Taxonomy Browser by Tax_id :400668
 
# TA INFO in replicon: NC_009654
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Mmwyl1_0353 Mmwyl1_0352 - 408801..409431 relBE */Xre-RelE
2 2 Mmwyl1_0664 Mmwyl1_0663 - 721595..722622 relBE */Xre-RelE
3 2 Mmwyl1_0817 Mmwyl1_0818 - 903344..904104 -/HEPN-MNT
4 2 Mmwyl1_1399 Mmwyl1_1398 - 1567814..1568318 RelBE or parDE */RHH-RelE
5 2 Mmwyl1_1401 Mmwyl1_1400 - 1568515..1569179 relBE or parDE */PHD-RelE
6 2 Mmwyl1_1748 Mmwyl1_1747 - 1974429..1974985 relBE or parDE */PHD-RelE
7 2 Mmwyl1_1783 Mmwyl1_1782 - 2013817..2014364 relBE or parDE */PHD-RelE
8 2 Mmwyl1_2492 Mmwyl1_2491 - 2798103..2798476 relBE */Xre-RelE
9 2 Mmwyl1_2493 Mmwyl1_2494 - 2798521..2799298 -/RHH-GNAT
10 2 Mmwyl1_2695 Mmwyl1_2696 - 3046748..3047317 relBE or parDE */PHD-RelE
11 2 Mmwyl1_3031 Mmwyl1_3032 - 3428034..3428673 -/HEPN-MNT
12 2 Mmwyl1_3205 Mmwyl1_3204 - 3633597..3635013 -/-
13 2 Mmwyl1_3849 Mmwyl1_3850 - 4345655..4346177 relBE or parDE */PHD-RelE
14 2 Mmwyl1_3977 Mmwyl1_3978 - 4482933..4483956 -/MerR-PIN
15 2 Mmwyl1_4021 Mmwyl1_4020 - 4545555..4546063 RelBE or parDE */RHH-RelE
16 2 Mmwyl1_4024 Mmwyl1_4023 - 4546343..4547162 phd-doc */PHD-Fic
17 2 Mmwyl1_4363 Mmwyl1_4364 - 4956028..4957690 hipBA */Xre-HipA
18 2 Mmwyl1_4376 Mmwyl1_4377 - 4973389..4974964 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Mmwyl1_0664-60.68Mmwyl1_0665HTH_XRE/HTH_XRE/HTH_3/HipB76.09NC_009654
2Mmwyl1_3744HTH_XRE/HTH_3/HTH_XRE76.43Mmwyl1_3745-62.9NC_009654
3Mmwyl1_2491VapI/HTH_3/HTH_XRE/HTH_XRE/HipB89.12Mmwyl1_2493-60.03NC_009654
4Mmwyl1_1401-65.35Mmwyl1_1402StbD80.48NC_009654
5Mmwyl1_1847-65Mmwyl1_1848ParE/Plasmid_stabil76.15NC_009654
6Mmwyl1_2894-68.29Mmwyl1_2895ParE76.65NC_009654
7Mmwyl1_3743-60.29Mmwyl1_3744HTH_XRE/HTH_3/HTH_XRE76.43NC_009654
8Mmwyl1_4020-63.61Mmwyl1_4021Plasmid_stabil73.85NC_009654
9Mmwyl1_4022Plasmid_killer/HigB90.12Mmwyl1_4023StbD93.78NC_009654
10Mmwyl1_2706COG172483.81Mmwyl1_2707COG1598/HTH_XRE/HTH_XRE/HTH_385.24NC_009654
11Mmwyl1_3850StbD91.29Mmwyl1_3849RelE93.16NC_009654
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.