TADB
Clostridium kluyveri DSM 555 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3964618
Link to NCBI Taxonomy Browser by Tax_id :431943
 
# TA INFO in replicon: NC_009706
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 CKL_1245 CKL_1244 - 1282924..1283812 -/HEPN-MNT
2 2 CKL_1751 CKL_1750 - 1851542..1852730 -/Xre-COG2856
3 2 CKL_1847 CKL_1848 - 1950518..1951725 -/Xre-Bro
4 2 CKL_1854 CKL_1853 - 1955566..1956192 hicBA */HicB-HicA
5 2 CKL_1910 CKL_1911 - 1988274..1989571 -/Xre-Bro
6 2 CKL_1952 CKL_1951 - 2023912..2024538 hicBA */HicB-HicA
7 2 CKL_2052 CKL_2051 - 2091040..2091884 -/HEPN-MNT
8 2 CKL_2072 CKL_2073 - 2110475..2110980 relBE or parDE */PHD-RelE
9 2 CKL_2075 CKL_2074 - 2111411..2112089 -/HEPN-MNT
10 2 CKL_2077 CKL_2076 - 2112311..2113151 -/HEPN-MNT
11 2 CKL_3284 CKL_3285 - 3344113..3344763 hicBA */HicB-HicA
12 2 CKL_3310 CKL_3311 - 3357019..3358281 -/Xre-Bro
13 2 CKL_3579 CKL_3580 - 3632550..3633186 mazEF, ccd or relBE */RHH-MazF
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1CKL_2073StbD92.59CKL_2072RelE/HigB/Plasmid_killer92.6NC_009706
2CKL_2005HTH_XRE/HTH_XRE/HTH_3/HipB/VapI63.65CKL_2006HTH_XRE/HTH_XRE/HTH_3/HipB87.07NC_009706
3CKL_1951COG159881.52CKL_1952COG172486.68NC_009706
4CKL_1853COG159881.52CKL_1854COG172485.58NC_009706
5CKL_3285COG159881.52CKL_3284COG172482.55NC_009706
6CKL_0056-62.45CKL_0057HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.96NC_009706
7CKL_2278-67.9CKL_2279HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.86NC_009706
8CKL_0076-60.58CKL_0077HTH_XRE/HTH_XRE/HTH_378.34NC_009706
9CKL_2568-60.03CKL_2567HTH_XRE/HTH_XRE/HTH_378.15NC_009706
10CKL_1929-60.29CKL_1930HTH_XRE/HTH_XRE/HTH_3/VapI/HipB77.07NC_009706
11CKL_1913-67.97CKL_1912HTH_XRE/HTH_XRE/HTH_3/HipB76.74NC_009706
12CKL_2745-60.97CKL_2746HTH_XRE/HTH_XRE/HTH_3/HipB/VapI76.59NC_009706
13CKL_3843-61CKL_3844PemK/MazF76.05NC_009706
14CKL_2014-68.13CKL_2013HTH_XRE/HTH_XRE/HTH_3/VapI75.44NC_009706
15CKL_2008-61CKL_2007HTH_XRE/HTH_XRE/HTH_3/HipB75.18NC_009706
16CKL_3315-65.35CKL_3314HTH_XRE/HTH_XRE/HTH_3/HipB75.03NC_009706
17CKL_2947-65.26CKL_2946HTH_XRE/HTH_XRE/HTH_3/HipB74.86NC_009706
18CKL_2865-60.32CKL_2864HTH_XRE/HTH_XRE/HTH_3/HipB74.05NC_009706
19CKL_0491-66.68CKL_0492HTH_XRE/HTH_XRE/HTH_3/VapI/HipB73.69NC_009706
20CKL_1919-60.06CKL_1920HTH_XRE/HTH_XRE/HipB/HTH_373.31NC_009706
21CKL_3896-61.55CKL_3895AbrB71.65NC_009706
22CKL_1816-67.68CKL_1817HTH_XRE/HTH_XRE/HTH_3/HTH_3/HipB71.35NC_009706
23CKL_0632-64.03CKL_0631VapI70.55NC_009706
24CKL_2279HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.86CKL_2280-63.1NC_009706
25CKL_1854COG172485.58CKL_1855-62.74NC_009706
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.