TADB
Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence. plasmid pXAUT01

# GENOME INFO
Genome size (bp) : 316164
Link to NCBI Taxonomy Browser by Tax_id :78245
 
# TA INFO in replicon: NC_009717
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Xaut_4793 Xaut_4794 - 5313..6496 vapBC */RHH-PIN
2 2 Xaut_4797 Xaut_4798 - 8873..9516 vapBC */RHH-PIN
3 2 Xaut_4895 Xaut_4896 - 112856..113763 -/COG5642-COG5654
4 2 Xaut_4941 Xaut_4942 - 164769..165883 -/Xre-Fic
5 2 Xaut_4954 Xaut_4955 - 175024..176039 relBE */AbrB-RelE
6 2 Xaut_4974 Xaut_4975 - 195531..196392 -/Xre-COG5654
7 2 Xaut_4992 Xaut_4991 - 212344..213023 -/PHD-MazFn
8 2 Xaut_4998 Xaut_4999 - 217369..217945 RelBE or parDE */RHH-RelE
9 2 Xaut_5008 Xaut_5007 - 227708..228377 -/PHD-MazFn
10 2 Xaut_5010 Xaut_5009 - 229104..230002 -/COG5642-COG5654

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Xaut_4999RelB85.69Xaut_4998Plasmid_stabil/ParE92.19NC_009717
2Xaut_4794COG442362.74Xaut_4793PIN/VapC74.88NC_009717
3Xaut_4943-60.48Xaut_4942HTH_XRE/HTH_3/HTH_XRE/HipB71.08NC_009717
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.