TADB
Rickettsia massiliae MTU5 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 1360898
Link to NCBI Taxonomy Browser by Tax_id :416276
 
# TA INFO in replicon: NC_009900
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 RMA_0128 RMA_0129 - 123890..124397 relBE or parDE */PHD-RelE
2 2 RMA_0169 RMA_0168 - 165010..165682 -/HEPN-MNT
3 2 RMA_0299 RMA_0298 - 302479..303064 relBE or parDE */PHD-RelE
4 2 RMA_0390 RMA_0391 - 394264..394980 vapBC */PHD-PIN
5 2 RMA_0530 RMA_0531 - 519598..520264 vapBC */AbrB-PIN
6 2 RMA_0861 RMA_0862 - 857543..858120 -/RHH-COG2929
7 2 RMA_1047 RMA_1046 - 1030295..1030998 vapBC */PHD-PIN
8 2 RMA_1338 RMA_1339 - 1314763..1315403 vapBC */PHD-PIN
9 2 RMA_1361 RMA_1362 - 1331221..1331745 RelBE or parDE */RHH-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1RMA_0391-67.97RMA_0390VapC/PIN/COG184874.82NC_009900
2RMA_1339StbD83.52RMA_1338VapC/PIN88.03NC_009900
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.