TADB
Frankia sp. EAN1pec chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 8982042
Link to NCBI Taxonomy Browser by Tax_id :298653
 
# TA INFO in replicon: NC_009921
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Franean1_0037 Franean1_0036 - 43699..44774 -/Xre-DUF397
2 2 Franean1_0440 Franean1_0439 - 520355..521103 -/COG2442-PIN
3 2 Franean1_0552 Franean1_0553 - 638792..639420 vapBC */PHD-PIN
4 2 Franean1_0697 Franean1_0698 - 817042..817636 -/HEPN-MNT
5 2 Franean1_0906 Franean1_0907 - 1057773..1058866 -/Xre-DUF397
6 2 Franean1_1329 Franean1_1328 - 1597864..1598955 -/Xre-DUF397
7 2 Franean1_1534 Franean1_1535 - 1837481..1838367 -/ArsR-COG3832
8 2 Franean1_1539 Franean1_1538 - 1840306..1840904 mazEF, ccd or relBE */RHH-MazF
9 2 Franean1_2170 Franean1_2169 - 2605721..2606759 -/RHH-GNAT
10 2 Franean1_2348 Franean1_2347 - 2795788..2796347 vapBC */AbrB-PIN
11 2 Franean1_4113 Franean1_4112 - 4896371..4897271 -/ArsR-COG3832
12 2 Franean1_5367 Franean1_5368 - 6472897..6473474 phd-doc */RHH-Fic
13 2 Franean1_5819 Franean1_5820 - 7062424..7063082 relBE */Xre-RelE
14 2 Franean1_5956 Franean1_5957 - 7260876..7261339 hicBA */HicB-HicA
15 2 Franean1_6320 Franean1_6321 - 7675789..7676387 -/COG2442-PIN
16 2 Franean1_6451 Franean1_6452 - 7844589..7846084 phd-doc */RHH-Fic
17 2 Franean1_6649 Franean1_6648 - 8076236..8077335 -/Xre-DUF397

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Franean1_1314-61.26Franean1_1313PemK/MazF74.3NC_009921
2Franean1_0553Phd86.93Franean1_0552VapC/PIN88.36NC_009921
3Franean1_5955-65Franean1_5956COG172484.1NC_009921
4Franean1_2347-61.1Franean1_2348PIN/COG1848/COG411373.11NC_009921
5Franean1_1538HicB/HicB83.93Franean1_1539MazF89.07NC_009921
6Franean1_5368-68.39Franean1_5367Doc/DOC75.07NC_009921
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.