TADB
Salinispora arenicola CNS-205 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5786361
Link to NCBI Taxonomy Browser by Tax_id :391037
 
# TA INFO in replicon: NC_009953
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Sare_0042 Sare_0041 - 49693..50765 -/Xre-DUF397
2 2 Sare_0099 Sare_0098 - 111087..112036 -/Xre-DUF397
3 2 Sare_0240 Sare_0241 - 270282..271116 -/ArsR-COG3832
4 2 Sare_0599 Sare_0600 - 680120..681201 -/Xre-DUF397
5 2 Sare_0696 Sare_0697 - 771125..772827 vapBC */Xre-PIN
6 2 Sare_0927 Sare_0926 - 1041099..1042078 -/Xre-DUF397
7 2 Sare_1159 Sare_1160 - 1309721..1310771 -/Xre-DUF397
8 2 Sare_1205 Sare_1204 - 1354284..1355126 -/ArsR-COG3832
9 2 Sare_1301 Sare_1300 - 1509217..1510285 -/Xre-DUF397
10 2 Sare_1379 Sare_1378 - 1590990..1591939 -/Xre-DUF397
11 2 Sare_1432 Sare_1433 - 1659470..1660413 -/Xre-DUF397
12 2 Sare_1540 Sare_1541 - 1776702..1777555 -/ArsR-COG3832
13 2 Sare_1548 Sare_1547 - 1781388..1782463 -/Xre-DUF397
14 2 Sare_1728 Sare_1729 - 2001350..2002425 -/Xre-DUF397
15 2 Sare_1786 Sare_1787 - 2060825..2061800 -/Xre-DUF397
16 2 Sare_2108 Sare_2109 - 2429245..2430113 -/ArsR-COG3832
17 2 Sare_2128 Sare_2127 - 2449736..2450717 -/Xre-DUF397
18 2 Sare_2231 Sare_2232 - 2567555..2568802 -/Xre-DUF397
19 2 Sare_2598 Sare_2599 - 2962572..2963197 vapBC */PHD-PIN
20 2 Sare_2601 Sare_2602 - 2967508..2968576 -/Xre-DUF397
21 2 Sare_2969 Sare_2968 - 3377033..3378090 -/Xre-DUF397
22 2 Sare_3025 Sare_3026 - 3436480..3437018 relBE or parDE */PHD-RelE
23 2 Sare_3101 Sare_3100 - 3523665..3524616 -/Xre-COG2856
24 2 Sare_4124 Sare_4123 - 4683382..4684652 -/Xre-DUF397
25 2 Sare_4256 Sare_4257 - 4829845..4830415 mazEF, ccd or relBE */RHH-MazF
26 2 Sare_4629 Sare_4628 - 5251052..5252352 -/ArsR-COG3832
27 2 Sare_4703 Sare_4702 - 5324271..5325656 -/Xre-COG2856
28 2 Sare_4869 Sare_4868 - 5521080..5522068 -/Xre-DUF397
29 2 Sare_4922 Sare_4921 - 5586975..5587389 hicBA */HicB-HicA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Sare_3749-61.42Sare_3750Phd70.08NC_009953
2Sare_4424-61.74Sare_4425VapC/PIN/COG184875.48NC_009953
3Sare_3698-61.42Sare_3699Phd70.08NC_009953
4Sare_4921COG159883.61Sare_4922COG172484.32NC_009953
5Sare_3026StbD/Phd89.28Sare_3025RelE90.56NC_009953
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.