TADB
Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence. plasmid pDSHI01

# GENOME INFO
Genome size (bp) : 190506
Link to NCBI Taxonomy Browser by Tax_id :398580
 
# TA INFO in replicon: NC_009955
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Dshi_3665 Dshi_3664 - 67147..67688 mazEF */XF1863-MazF
2 2 Dshi_3729 Dshi_3730 - 136657..137498 relBE */AbrB-RelE
3 2 Dshi_3750 Dshi_3749 - 156052..156592 RelBE or parDE */RHH-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Dshi_3664-63.81Dshi_3665MazF/PemK74.13NC_009955
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.