TADB
Dinoroseobacter shibae DFL 12 plasmid pDSHI04, complete sequence. plasmid pDSHI04

# GENOME INFO
Genome size (bp) : 86208
Link to NCBI Taxonomy Browser by Tax_id :398580
 
# TA INFO in replicon: NC_009958
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Dshi_4113 Dshi_4112 - 45616..46232 phd-doc */PHD-Fic
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Dshi_4086COG360990.15Dshi_4087ParE/Plasmid_stabil91.35NC_009958
2Dshi_4087ParE/Plasmid_stabil91.35Dshi_4088-64.03NC_009958
3Dshi_4112StbD89.14Dshi_4113Doc/DOC89.32NC_009958
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.