TADB
Shewanella baltica OS195 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5347283
Link to NCBI Taxonomy Browser by Tax_id :399599
 
# TA INFO in replicon: NC_009997
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Sbal195_0379 Sbal195_0378 - 432234..432694 hipBA */Xre-HipA
2 2 Sbal195_0678 Sbal195_0677 - 824007..825548 hipBA */Xre-HipA
3 2 Sbal195_0753 Sbal195_0752 - 904490..905286 -/RHH-GNAT
4 2 Sbal195_0793 Sbal195_0794 - 931939..932633 relBE */Xre-RelE
5 2 Sbal195_1992 Sbal195_1993 - 2379448..2380067 relBE */Xre-RelE
6 2 Sbal195_3381 Sbal195_3380 - 3999215..4000821 hipBA */Xre-HipA
7 2 Sbal195_3479 Sbal195_3478 - 4100606..4102212 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Sbal195_3485-64.19Sbal195_3486HTH_XRE/HTH_3/HTH_XRE/HipB77.24NC_009997
2Sbal195_2030-64.19Sbal195_2029HTH_XRE/HTH_XRE/HTH_3/HipB77.24NC_009997
3Sbal195_3389-64.19Sbal195_3390HTH_XRE/HTH_3/HTH_XRE/HipB77.24NC_009997
4Sbal195_1980-64.19Sbal195_1979HTH_XRE/HTH_3/HTH_XRE/HipB76.88NC_009997
5Sbal195_0687-60.1Sbal195_0686VapI71.86NC_009997
6Sbal195_2193-64.19Sbal195_2192HTH_473.43NC_009997
7Sbal195_0777-61.52Sbal195_0776HTH_XRE/HipB/HTH_3/HTH_XRE78.23NC_009997
8Sbal195_1429-60.58Sbal195_1428HTH_3/VapI/HTH_XRE/HTH_XRE/HipB72.34NC_009997
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.