TADB
Delftia acidovorans SPH-1 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 6767514
Link to NCBI Taxonomy Browser by Tax_id :398578
 
# TA INFO in replicon: NC_010002
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Daci_0282 Daci_0283 - 314479..316141 hipBA */Xre-HipA
2 2 Daci_1212 Daci_1211 - 1350361..1351032 relBE */Xre-RelE
3 2 Daci_1245 Daci_1244 - 1388492..1389171 RelBE or parDE */RHH-RelE
4 2 Daci_1390 Daci_1389 - 1546117..1546799 vapBC */PHD-PIN
5 2 Daci_1535 Daci_1536 - 1723829..1724558 relBE */Xre-RelE
6 2 Daci_2051 Daci_2050 - 2243968..2244635 -/ArsR-COG3832
7 2 Daci_2578 Daci_2577 - 2853308..2855022 hipBA */Xre-HipA
8 2 Daci_2612 Daci_2611 - 2880318..2882032 hipBA */Xre-HipA
9 2 Daci_2800 Daci_2799 - 3076872..3077551 vapBC */RHH-PIN
10 2 Daci_3012 Daci_3011 - 3315045..3315754 vapBC */PHD-PIN
11 2 Daci_3757 Daci_3758 - 4130208..4130881 vapBC */AbrB-PIN
12 2 Daci_3962 Daci_3961 - 4362787..4363472 vapBC */PHD-PIN
13 2 Daci_4188 Daci_4189 - 4578340..4579115 relBE */AbrB-RelE
14 2 Daci_4252 Daci_4253 - 4653459..4654099 vapBC */AbrB-PIN
15 2 Daci_4663 Daci_4662 - 5119203..5120175 -/Xre-COG2856
16 2 Daci_4802 Daci_4803 - 5299802..5300514 relBE */Xre-RelE
17 2 Daci_4838 Daci_4839 - 5343323..5343954 RelBE or parDE */RHH-RelE
18 2 Daci_5159 Daci_5158 - 5724896..5725455 RelBE or parDE */RHH-RelE
19 2 Daci_5522 Daci_5523 - 6140641..6141380 vapBC */RHH-PIN
20 2 Daci_5817 Daci_5816 - 6472881..6473461 vapBC */RHH-PIN
21 2 Daci_5833 Daci_5834 - 6490374..6490957 RelBE or parDE */RHH-RelE
22 2 Daci_5841 Daci_5842 - 6497213..6497892 vapBC */RHH-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Daci_2577HTH_XRE/HTH_XRE/HTH_3/HipB84.07Daci_2578HipA86.23NC_010002
2Daci_2611HTH_XRE/HTH_XRE/HTH_3/HipB84.07Daci_2612HipA86.23NC_010002
3Daci_5816HTH_484.83Daci_5817VapC/PIN/COG184886.03NC_010002
4Daci_2434-64.13Daci_2435Plasmid_stabil/ParE78.17NC_010002
5Daci_3758-68.13Daci_3757VapC/PIN/COG184874.9NC_010002
6Daci_4253-63.1Daci_4252PIN/COG184870.74NC_010002
7Daci_0488-60.55Daci_0487VapI70.28NC_010002
8Daci_1536HTH_XRE/HTH_XRE/HTH_3/HipB73.62Daci_1537-62.77NC_010002
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.