Staphylococcus aureus subsp. aureus USA300 TCH1516 chromosome, chromosome

Genome size (bp) : 2872915
Link to NCBI Taxonomy Browser by Tax_id :451516
# TA INFO in replicon: NC_010079
1 2 USA300HOU_0853 USA300HOU_0854 - 898749..899551 -/Xre-COG2856
2 2 USA300HOU_1487 USA300HOU_1486 - 1602028..1602831 -/Xre-COG2856
3 2 USA300HOU_2063 USA300HOU_2064 - 2188412..2188941 mazEF, ccd or relBE */RHH-MazF
4 2 USA300HOU_2387 USA300HOU_2388 - 2530232..2530749 relBE or parDE */PHD-RelE
5 2 USA300HOU_2446 USA300HOU_2447 - 2587080..2587603 relBE or parDE */PHD-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.