TADB
Bordetella petrii DSM 12804 chromosome

# GENOME INFO
Genome size (bp) : 5287950
Link to NCBI Taxonomy Browser by Tax_id :340100
 
# TA INFO in replicon: NC_010170
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Bpet0005 Bpet0004 - 5240..6885 hipBA */Xre-HipA
2 2 Bpet0232 Bpet0231 - 253237..254810 hipBA */Xre-HipA
3 2 Bpet0269 Bpet0270 - 297032..298761 -/Xre-COG5654
4 2 Bpet1090 Bpet1091 - 1154153..1155424 -/Xre-COG5654
5 2 Bpet1307 Bpet1308 - 1370007..1370800 -/RHH-GNAT
6 2 Bpet1352 Bpet1353 - 1410780..1412434 hipBA */Xre-HipA
7 2 Bpet1507 Bpet1508 - 1556705..1557480 relBE */AbrB-RelE
8 2 Bpet2167 Bpet2168 - 2251969..2252652 higBA (relBE) */COG5606-RelE
9 2 Bpet2255 Bpet2254 - 2338108..2339741 hipBA */Xre-HipA
10 2 Bpet2983 Bpet2982 - 3128895..3129751 -/ArsR-COG3832
11 2 Bpet3501 Bpet3500 - 3694208..3695142 -/ArsR-COG3832
12 2 Bpet4256 Bpet4255 - 4517283..4518058 relBE */AbrB-RelE
13 2 Bpet4546 Bpet4547 - 4806522..4807038 -/RHH-COG2929
14 2 Bpet4638 Bpet4639 - 4896631..4897813 -/Xre-COG2856

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Bpet1379-61.52Bpet1380PIN/COG1848/COG4113/VapC87.18NC_010170
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.