TADB
Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome, chromosome

# GENOME INFO
Genome size (bp) : 2242062
Link to NCBI Taxonomy Browser by Tax_id :434271
 
# TA INFO in replicon: NC_010278
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 APJL_0499 APJL_0498 - 549466..550052 -/RHH-COG2929
2 2 APJL_0659 APJL_0660 - 722007..722657 vapBC */AbrB-PIN
3 2 APJL_0757 APJL_0758 - 830729..831260 -/RHH-COG2929
4 2 APJL_0961 APJL_0962 - 1056174..1057199 -/Xre-COG2856
5 2 APJL_1219 APJL_1220 - 1339933..1340619 vapBC */PHD-PIN
6 2 APJL_1288 APJL_1287 - 1417602..1418110 relBE or parDE */PHD-RelE
7 2 APJL_1376 APJL_1375 - 1511568..1512213 relBE */Xre-RelE
8 2 APJL_1565 APJL_1566 - 1713587..1714318 -/RHH-GNAT
9 2 APJL_1757 APJL_1756 - 1913969..1915502 hipBA */Xre-HipA
10 2 APJL_1767 APJL_1766 - 1929188..1929816 vapBC */AbrB-PIN
11 2 APJL_1864 APJL_1865 - 2013440..2014155 vapBC */PHD-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1APJL_0501-65.26APJL_0502ParE/RelE78.6NC_010278
2APJL_1232-60.13APJL_1233HTH_473.33NC_010278
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.