TADB
Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 2362816
Link to NCBI Taxonomy Browser by Tax_id :340099
 
# TA INFO in replicon: NC_010321
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Teth39_0043 Teth39_0042 - 41263..41980 vapBC */COG2886-PIN
2 2 Teth39_0072 Teth39_0073 - 65925..66873 ygiT-mqsR (relBE) */Xre-YgiU
3 2 Teth39_0489 Teth39_0488 - 513468..514096 mazEF, ccd or relBE */RHH-MazF
4 2 Teth39_0512 Teth39_0511 - 545012..545753 -/HEPN-MNT
5 2 Teth39_0555 Teth39_0556 - 590771..591503 -/HEPN-MNT
6 2 Teth39_1480 Teth39_1481 - 1513865..1514423 relBE or parDE */PHD-RelE
7 2 Teth39_1483 Teth39_1482 - 1514629..1515466 -/HEPN-MNT
8 2 Teth39_1563 Teth39_1562 - 1592887..1593760 -/HEPN-MNT
9 2 Teth39_1569 Teth39_1568 - 1602080..1602960 -/HEPN-MNT
10 2 Teth39_1581 Teth39_1582 - 1613556..1614061 relBE or parDE */PHD-RelE
11 2 Teth39_1602 Teth39_1601 - 1634222..1635893 -/HEPN-MNT
12 2 Teth39_1612 Teth39_1611 - 1645416..1646293 -/HEPN-MNT
13 2 Teth39_1905 Teth39_1906 - 1954684..1955308 mazEF */Xre-MazF
14 2 Teth39_2083 Teth39_2084 - 2152598..2153301 vapBC */PHD-PIN
15 2 Teth39_2217 Teth39_2216 - 2290399..2291347 ygiT-mqsR (relBE) */Xre-YgiU

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Teth39_0488HTH_4/COG360986.67Teth39_0489PemK/MazF88.89NC_010321
2Teth39_1671-66.22Teth39_1670RelE80.35NC_010321
3Teth39_1906-62.55Teth39_1905MazF/PemK74.02NC_010321
4Teth39_0034-63.19Teth39_0033HTH_XRE/HTH_XRE/HTH_3/HipB/VapI77.75NC_010321
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.