TADB
Shewanella halifaxensis HAW-EB4 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5226917
Link to NCBI Taxonomy Browser by Tax_id :458817
 
# TA INFO in replicon: NC_010334
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Shal_0419 Shal_0420 - 494094..495636 hipBA */Xre-HipA
2 2 Shal_3046 Shal_3045 - 3715177..3716120 vapBC */AbrB-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Shal_2241-64.19Shal_2242HTH_472.7NC_010334
2Shal_0351-60.97Shal_0350HTH_XRE/HTH_XRE/HipB/HTH_373.19NC_010334
3Shal_4179-62.42Shal_4180HTH_XRE/HTH_XRE/HTH_3/VapI/HipB73.41NC_010334
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.