TADB
Candidatus Desulforudis audaxviator MP104C chromosome, complete chromosome

# GENOME INFO
Genome size (bp) : 2349476
Link to NCBI Taxonomy Browser by Tax_id :477974
 
# TA INFO in replicon: NC_010424
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Daud_0061 Daud_0062 - 65355..66052 vapBC */PHD-PIN
2 2 Daud_0132 Daud_0133 - 148690..149398 -/HEPN-MNT
3 2 Daud_0206 Daud_0205 - 235770..236497 vapBC */PHD-PIN
4 2 Daud_0319 Daud_0320 - 345236..345914 vapBC */PHD-PIN
5 2 Daud_0364 Daud_0363 - 393994..394856 -/HEPN-MNT
6 2 Daud_0375 Daud_0376 - 402309..402988 vapBC */AbrB-PIN
7 2 Daud_0402 Daud_0403 - 446023..446767 mazEF */Xre-MazF
8 2 Daud_0406 Daud_0407 - 448865..449893 vapBC */AbrB-PIN
9 2 Daud_0415 Daud_0414 - 456176..456867 vapBC */RHH-PIN
10 2 Daud_0750 Daud_0751 - 783202..783793 relBE or parDE */PHD-RelE
11 2 Daud_0764 Daud_0763 - 793088..793713 relBE */Xre-RelE
12 2 Daud_0769 Daud_0768 - 795365..795801 hicBA */HicB-HicA
13 2 Daud_0983 Daud_0984 - 1039233..1039867 vapBC */RHH-PIN
14 2 Daud_1518 Daud_1517 - 1602843..1603449 -/RHH-COG2929
15 2 Daud_1678 Daud_1679 - 1774626..1775502 -/HEPN-MNT
16 2 Daud_1681 Daud_1682 - 1775788..1776395 -/COG2442-PIN
17 2 Daud_1709 Daud_1708 - 1799672..1800397 vapBC */AbrB-PIN
18 2 Daud_1831 Daud_1832 - 1933297..1933933 mazEF, ccd or relBE */RHH-MazF
19 2 Daud_1918 Daud_1919 - 2020263..2020801 relBE */AbrB-RelE
20 2 Daud_2106 Daud_2107 - 2225117..2225808 vapBC */AbrB-PIN
21 2 Daud_2114 Daud_2113 - 2231322..2231980 vapBC */AbrB-PIN
22 2 Daud_2128 Daud_2127 - 2245112..2245770 vapBC */AbrB-PIN
23 2 Daud_2130 Daud_2131 - 2250293..2251046 vapBC */PHD-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Daud_2122COG1848/PIN83.57Daud_2123HTH_4/COG360989.54NC_010424
2Daud_0408PIN86.26Daud_0407SpoVT_AbrB/AbrB89.29NC_010424
3Daud_2123HTH_4/COG360989.54Daud_2124MazF/PemK88.61NC_010424
4Daud_0082-60.32Daud_0081HTH_3/HTH_XRE77.58NC_010424
5Daud_1832-62.97Daud_1831MazF/PemK76.03NC_010424
6Daud_0984-63.1Daud_0983VapC/PIN/COG184875.95NC_010424
7Daud_0403-62.61Daud_0402PemK/MazF75.21NC_010424
8Daud_1713-63.1Daud_1712PIN/VapC70.78NC_010424
9Daud_0983VapC/PIN/COG184875.95Daud_0982HTH_XRE/HTH_XRE/HTH_3/HipB62.57NC_010424
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.