TADB
Shewanella woodyi ATCC 51908 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5935403
Link to NCBI Taxonomy Browser by Tax_id :392500
 
# TA INFO in replicon: NC_010506
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Swoo_0495 Swoo_0494 - 702949..704452 hipBA */Xre-HipA
2 2 Swoo_0497 Swoo_0496 - 704693..706320 hipBA */Xre-HipA
3 2 Swoo_2462 Swoo_2461 - 3007429..3008348 -/COG5642-COG5654
4 2 Swoo_3486 Swoo_3485 - 4262154..4263247 -/COG5642-COG5654
5 2 Swoo_4571 Swoo_4570 - 5540226..5541768 hipBA */Xre-HipA
6 2 Swoo_4573 Swoo_4574 - 5542356..5543920 hipBA */Xre-HipA
7 2 Swoo_4633 Swoo_4632 - 5603166..5603962 -/RHH-GNAT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Swoo_0496HTH_XRE/HTH_XRE/HTH_385.95Swoo_0497HipA86.57NC_010506
2Swoo_4744-60.16Swoo_4745HTH_XRE/HTH_XRE/HTH_3/VapI/HipB76.33NC_010506
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.