TADB
Haemophilus somnus 2336 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2263857
Link to NCBI Taxonomy Browser by Tax_id :228400
 
# TA INFO in replicon: NC_010519
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 HSM_0247 HSM_0248 - 262158..263011 -/Xre-COG2856
2 2 HSM_0890 HSM_0889 - 1022474..1023125 hicBA */HicB-HicA
3 2 HSM_0913 HSM_0912 - 1047495..1048077 relBE */Xre-RelE
4 2 HSM_1143 HSM_1142 - 1312129..1312640 relBE or parDE */PHD-RelE
5 2 HSM_1147 HSM_1148 - 1314204..1314756 relBE */Xre-RelE
6 2 HSM_1154 HSM_1155 - 1319575..1320194 RelBE or parDE */RHH-RelE
7 2 HSM_1446 HSM_1445 - 1651203..1651761 RelBE or parDE */RHH-RelE
8 2 HSM_1450 HSM_1449 - 1653906..1654701 -/RHH-GNAT
9 2 HSM_1598 HSM_1599 - 1846733..1847332 RelBE or parDE */RHH-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1HSM_0912HTH_XRE/HTH_XRE/HTH_3/HipB85.91HSM_0913RelE91.83NC_010519
2HSM_1148HTH_XRE/HTH_XRE/HTH_3/HipB85.35HSM_1147RelE91.83NC_010519
3HSM_1881-60.58HSM_1882HTH_XRE/HTH_377.48NC_010519
4HSM_0878-64.03HSM_0879HTH_3/HTH_XRE/HTH_XRE77.4NC_010519
5HSM_0249-62.42HSM_0250HTH_XRE/HTH_XRE75.35NC_010519
6HSM_0905-67.1HSM_0904HTH_XRE/HTH_XRE/HTH_372.89NC_010519
7HSM_1155-67.93HSM_1154Plasmid_stabil/ParE/RelE73.72NC_010519
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.