TADB
Leptothrix cholodnii SP-6 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4909403
Link to NCBI Taxonomy Browser by Tax_id :395495
 
# TA INFO in replicon: NC_010524
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Lcho_0357 Lcho_0358 - 390738..391371 -/HEPN-MNT
2 2 Lcho_0630 Lcho_0631 - 677323..677906 vapBC */RHH-PIN
3 2 Lcho_0646 Lcho_0647 - 697323..698101 -/HEPN-MNT
4 2 Lcho_1157 Lcho_1156 - 1239096..1239643 RelBE or parDE */RHH-RelE
5 2 Lcho_1276 Lcho_1275 - 1360418..1361222 -/HEPN-MNT
6 2 Lcho_1565 Lcho_1566 - 1665083..1665715 vapBC */PHD-PIN
7 2 Lcho_1579 Lcho_1578 - 1677472..1678107 phd-doc */AbrB-Fic
8 2 Lcho_2140 Lcho_2141 - 2343208..2343703 relBE */Xre-RelE
9 2 Lcho_2332 Lcho_2333 - 2530841..2531625 -/HEPN-MNT
10 2 Lcho_2951 Lcho_2952 - 3253395..3254052 vapBC */AbrB-PIN
11 2 Lcho_2963 Lcho_2964 - 3263344..3263846 relBE or parDE */PHD-RelE
12 2 Lcho_3171 Lcho_3172 - 3502655..3503279 relBE */Xre-RelE
13 2 Lcho_3353 Lcho_3352 - 3729571..3730319 -/HEPN-MNT
14 2 Lcho_3717 Lcho_3718 - 4158994..4159885 -/Xre-COG3832
15 2 Lcho_4190 Lcho_4191 - 4695666..4696225 -/COG2442-PIN
16 2 Lcho_4334 Lcho_4335 - 4851406..4852076 vapBC */RHH-PIN

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Lcho_1578SpoVT_AbrB/MazE82.76Lcho_1579Doc/DOC89.65NC_010524
2Lcho_0625-65.68Lcho_0626PIN/VapC85.96NC_010524
3Lcho_0631-67.55Lcho_0630PIN/VapC/COG184872.88NC_010524
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.