TADB
Xylella fastidiosa M23 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2535690
Link to NCBI Taxonomy Browser by Tax_id :405441
 
# TA INFO in replicon: NC_010577
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 XfasM23_0226 XfasM23_0225 - 303282..303912 vapBC */AbrB-PIN
2 2 XfasM23_0360 XfasM23_0361 - 457447..458014 relBE */Xre-RelE
3 2 XfasM23_0362 XfasM23_0363 - 458102..458808 ygiT-mqsR (relBE) */Xre-YgiU
4 2 XfasM23_1023 XfasM23_1024 - 1177407..1178011 higBA (relBE) */COG5606-RelE
5 2 XfasM23_1038 XfasM23_1039 - 1188103..1188719 higBA (relBE) */COG5606-RelE
6 2 XfasM23_1055 XfasM23_1054 - 1209621..1210212 -/RHH-COG2929
7 2 XfasM23_1164 XfasM23_1163 - 1307773..1308304 RelBE or parDE */RHH-RelE
8 2 XfasM23_1253 XfasM23_1254 - 1389058..1389663 relBE */Xre-RelE
9 2 XfasM23_1261 XfasM23_1260 - 1392663..1393164 RelBE or parDE */RHH-RelE
10 2 XfasM23_1424 XfasM23_1425 - 1581010..1581600 relBE */Xre-RelE
11 2 XfasM23_1427 XfasM23_1426 - 1581780..1582366 hicBA */HicB-HicA
12 2 XfasM23_1812 XfasM23_1813 - 2022690..2023345 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1XfasM23_1425VapI/HTH_3/HTH_XRE/HTH_XRE/HipB91.84XfasM23_1424HigB/Plasmid_killer92.57NC_010577
2XfasM23_1017-62.9XfasM23_1016Plasmid_stabil/ParE77.1NC_010577
3XfasM23_0973-62.42XfasM23_0974HTH_3/HTH_XRE/HTH_XRE/HipB70.38NC_010577
4XfasM23_1260HTH_486.69XfasM23_1261RelE93.73NC_010577
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.