TADB
Shigella boydii CDC 3083-94 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4615997
Link to NCBI Taxonomy Browser by Tax_id :344609
 
# TA INFO in replicon: NC_010658
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SbBS512_E1151 SbBS512_E1152 - 1044153..1044747 RelBE or parDE */RHH-RelE
2 2 SbBS512_E1215 SbBS512_E1214 - 1121760..1122262 relBE or parDE */PHD-RelE
3 2 SbBS512_E3091 SbBS512_E3090 - 2888798..2889381 mazEF */AbrB-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SbBS512_E1152COG360989.59SbBS512_E1151ParE/Plasmid_stabil91.57NC_010658
2SbBS512_E2780HTH_XRE/HTH_XRE/HTH_3/HipB82.89SbBS512_E2781HTH_XRE/HTH_XRE84.2NC_010658
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.