TADB
Xanthomonas oryzae pv. oryzae PXO99A chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5240075
Link to NCBI Taxonomy Browser by Tax_id :360094
 
# TA INFO in replicon: NC_010717
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 PXO_03336 PXO_03335 - 148570..149225 relBE or parDE */PHD-RelE
2 2 PXO_03586 PXO_03585 - 284730..286624 hipBA */Xre-HipA
3 2 PXO_03904 PXO_03903 - 334586..335175 relBE */Xre-RelE
4 2 PXO_00062 PXO_00063 - 1799807..1800462 vapBC */AbrB-PIN
5 2 PXO_01415 PXO_01414 - 3488376..3489895 -/-
6 2 PXO_02086 PXO_02087 - 3818543..3819199 phd-doc */AbrB-Fic
7 2 PXO_02069 PXO_02068 - 3835759..3836337 RelBE or parDE */RHH-RelE
8 2 PXO_02062 PXO_02061 - 3844366..3845022 RelBE or parDE */RHH-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1PXO_03903VapI/HTH_3/HTH_XRE/HTH_XRE/HipB88.48PXO_03904HigB/Plasmid_killer94.27NC_010717
2PXO_00063AbrB/SpoVT_AbrB/MazE85.99PXO_00062VapC/PIN/COG184887.48NC_010717
3PXO_02068-61.84PXO_02069Plasmid_stabil/ParE75.66NC_010717
4PXO_03585HTH_XRE/HTH_XRE/HTH_3/HipB/VapI63.38PXO_03586HipA85.88NC_010717
5PXO_02061-60.29PXO_02062Plasmid_stabil/ParE75.48NC_010717
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.