TADB
Geobacter lovleyi SZ chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3917761
Link to NCBI Taxonomy Browser by Tax_id :398767
 
# TA INFO in replicon: NC_010814
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Glov_0060 Glov_0059 - 61396..61973 hicBA */HicB-HicA
2 2 Glov_0067 Glov_0068 - 70176..70834 vapBC */RHH-PIN
3 2 Glov_0191 Glov_0190 - 176269..178236 -/Xre-Fic
4 2 Glov_0325 Glov_0326 - 299514..301134 hipBA */Xre-HipA
5 2 Glov_0607 Glov_0608 - 603894..604482 relBE */Xre-RelE
6 2 Glov_1131 Glov_1130 - 1183157..1183858 relBE */Xre-RelE
7 2 Glov_1134 Glov_1133 - 1184727..1185318 relBE */Xre-RelE
8 2 Glov_1224 Glov_1225 - 1272691..1273355 vapBC */RHH-PIN
9 2 Glov_1581 Glov_1580 - 1673911..1674602 vapBC */PHD-PIN
10 2 Glov_1683 Glov_1682 - 1794165..1794709 RelBE or parDE */RHH-RelE
11 2 Glov_2071 Glov_2070 - 2206750..2207356 vapBC */AbrB-PIN
12 2 Glov_2132 Glov_2131 - 2274511..2275154 vapBC */AbrB-PIN
13 2 Glov_2138 Glov_2139 - 2286420..2287005 hicBA */HicB-HicA
14 2 Glov_2221 Glov_2220 - 2369261..2369858 -/RHH-COG2929
15 2 Glov_2470 Glov_2471 - 2641544..2642103 mazEF */AbrB-MazF
16 2 Glov_2517 Glov_2518 - 2691326..2692914 hipBA */Xre-HipA
17 2 Glov_2565 Glov_2564 - 2749615..2750663 -/Xre-Fic
18 2 Glov_2585 Glov_2586 - 2772435..2772979 RelBE or parDE */RHH-RelE
19 2 Glov_2897 Glov_2898 - 3103523..3105094 hipBA */Xre-HipA
20 2 Glov_3039 Glov_3038 - 3254668..3255304 -/HEPN-MNT
21 2 Glov_3492 Glov_3491 - 3749639..3750405 relBE */Xre-RelE
22 2 Glov_3534 Glov_3533 - 3799998..3801109 -/Xre-Fic
23 2 Glov_3572 Glov_3573 - 3845017..3845626 vapBC */PHD-PIN
24 2 Glov_3592 Glov_3593 - 3861160..3861844 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Glov_3490-60.16Glov_3491HTH_XRE/HTH_3/HTH_XRE/VapI73.61NC_010814
2Glov_2070-65.26Glov_2071COG1848/PIN/VapC73.64NC_010814
3Glov_1221-66.68Glov_1222HTH_XRE/HTH_XRE/HTH_377.19NC_010814
4Glov_1682-63.1Glov_1683Plasmid_stabil/ParE79.69NC_010814
5Glov_0068-62.42Glov_0067VapC72.58NC_010814
6Glov_2471MazE/SpoVT_AbrB/VagC91.61Glov_2472-67.16NC_010814
7Glov_3491HTH_XRE/HTH_3/HTH_XRE/VapI73.61Glov_3492-63.23NC_010814
8Glov_3572VapC/PIN/COG184886.76Glov_3571-60.03NC_010814
9Glov_0608VapI/HTH_XRE/HTH_XRE/HTH_3/COG5499/HipB86.16Glov_0607HigB/Plasmid_killer93.74NC_010814
10Glov_2586COG360989.46Glov_2585ParE/Plasmid_stabil91.03NC_010814
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.