TADB
Cellvibrio japonicus Ueda107 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4576573
Link to NCBI Taxonomy Browser by Tax_id :498211
 
# TA INFO in replicon: NC_010995
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 CJA_0021 CJA_0022 - 44404..45524 -/Xre-COG5654
2 2 CJA_0201 CJA_0200 - 254812..256349 hipBA */Xre-HipA
3 2 CJA_0820 CJA_0821 - 971650..972461 relBE */Xre-RelE
4 2 CJA_1013 CJA_1012 - 1193932..1194520 relBE or parDE */PHD-RelE
5 2 CJA_1098 CJA_1097 - 1293198..1293811 vapBC */RHH-PIN
6 2 CJA_1207 CJA_1208 - 1418589..1419736 -/Xre-COG2856
7 2 CJA_1211 CJA_1212 - 1422675..1423738 -/Xre-Fic
8 2 CJA_1213 CJA_1214 - 1424045..1424712 higBA (relBE) */COG5606-RelE
9 2 CJA_1541 CJA_1542 - 1785321..1786927 hipBA */Xre-HipA
10 2 CJA_2546 CJA_2545 - 2975662..2977318 hipBA */Xre-HipA
11 2 CJA_2979 CJA_2977 - 3493066..3493579 relBE or parDE */PHD-RelE
12 2 CJA_3302 CJA_3303 - 3949352..3949797 RelBE or parDE */RHH-RelE
13 2 CJA_3607 CJA_3608 - 4313978..4314612 vapBC */AbrB-PIN
14 2 CJA_3612 CJA_3613 - 4316955..4317575 relBE */Xre-RelE
15 2 CJA_3701 CJA_3702 - 4442706..4444411 hipBA */Xre-HipA
16 2 CJA_3710 CJA_3709 - 4451890..4452451 RelBE or parDE */RHH-RelE
17 2 CJA_3725 CJA_3726 - 4465312..4465946 relBE or parDE */PHD-RelE
18 2 CJA_3740 CJA_3739 - 4478509..4480133 hipBA */Xre-HipA
19 2 CJA_3741 CJA_3742 - 4480147..4481090 -/ArsR-COG3832

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1CJA_3613VapI/HTH_XRE/HTH_XRE/HTH_390.09CJA_3612HigB/Plasmid_killer92.26NC_010995
2CJA_3702HTH_XRE/HTH_XRE/HTH_3/HipB73.07CJA_3701HipA84.24NC_010995
3CJA_3709-68.29CJA_3710Plasmid_stabil/ParE/RelE79.39NC_010995
4CJA_3702HTH_XRE/HTH_XRE/HTH_3/HipB73.07CJA_3703-63.61NC_010995
5CJA_0013-60.55CJA_0012HTH_3/HTH_XRE/HTH_XRE70.37NC_010995
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.