TADB
Lactobacillus casei BL23 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 3079196
Link to NCBI Taxonomy Browser by Tax_id :543734
 
# TA INFO in replicon: NC_010999
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 LCABL_00900 LCABL_00910 - 89211..89842 mazEF */AbrB-MazF
2 2 LCABL_04680 LCABL_04670 - 464145..464773 relBE */Xre-RelE
3 2 LCABL_05540 LCABL_05550 - 562780..563548 -/Xre-COG2856
4 2 LCABL_09600 LCABL_09610 - 932740..933955 -/Xre-COG2856
5 2 LCABL_10830 LCABL_10840 - 1046867..1047594 -/Xre-COG2856
6 2 LCABL_12970 LCABL_12980 - 1254894..1255641 -/Xre-COG2856
7 2 LCABL_14510 LCABL_14520 - 1380139..1381435 -/RHH-GNAT
8 2 LCABL_27260 LCABL_27270 - 2681796..2682447 mazEF, ccd or relBE */RHH-MazF

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1LCABL_14520RelB84.27LCABL_14530RelE87.38NC_010999
2LCABL_13000-65LCABL_12990HTH_XRE/HTH_XRE/HTH_3/HipB/VapI78.75NC_010999
3LCABL_13120-61.1LCABL_13110HTH_XRE/HTH_XRE/HTH_378.43NC_010999
4LCABL_27270-67.16LCABL_27260PemK/MazF76.21NC_010999
5LCABL_11510-63.61LCABL_11520HTH_XRE/HTH_XRE/HTH_3/HipB/VapI76.08NC_010999
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.