TADB
Streptococcus pneumoniae G54 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 2078953
Link to NCBI Taxonomy Browser by Tax_id :512566
 
# TA INFO in replicon: NC_011072
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SPG_0259 SPG_0258 - 252704..253238 RelBE or parDE */RHH-RelE
2 2 SPG_0815 SPG_0814 - 787916..788562 phd-doc */AbrB-Fic
3 2 SPG_1114 SPG_1115 - 1092961..1093459 RelBE or parDE */RHH-RelE
4 2 SPG_1676 SPG_1675 - 1616962..1617630 hicBA */HicB-HicA
5 2 SPG_1845 SPG_1846 - 1757212..1757971 -/Xre-COG2856

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SPG_0814SpoVT_AbrB/MazE88.88SPG_0815DOC/Doc88.93NC_011072
2SPG_1675COG159880.97SPG_1676COG172482.23NC_011072
3SPG_1115-65.71SPG_1114RelE80.34NC_011072
4SPG_1362-60.45SPG_1363HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.8NC_011072
5SPG_2055-61.74SPG_2056HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32NC_011072
6SPG_1813-60.29SPG_1814HTH_XRE/HTH_3/HTH_XRE73.12NC_011072
7SPG_0301-60.1SPG_0302HTH_XRE/HTH_XRE/HTH_3/VapI/HipB72.77NC_011072
8SPG_2056HTH_XRE/HTH_XRE/HTH_3/HipB/VapI74.32SPG_2057-63.19NC_011072
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.