TADB
Geobacter bemidjiensis Bem chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 4615150
Link to NCBI Taxonomy Browser by Tax_id :404380
 
# TA INFO in replicon: NC_011146
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Gbem_0024 Gbem_0025 - 31125..31696 mazEF */AbrB-MazF
2 2 Gbem_0058 Gbem_0059 - 70364..71454 -/COG5642-COG5654
3 2 Gbem_0754 Gbem_0753 - 888104..888831 -/HEPN-MNT
4 2 Gbem_1475 Gbem_1476 - 1707561..1708285 -/HEPN-MNT
5 2 Gbem_1828 Gbem_1829 - 2125046..2125697 relBE */Xre-RelE
6 2 Gbem_1907 Gbem_1906 - 2208046..2208640 relBE */Xre-RelE
7 2 Gbem_1917 Gbem_1918 - 2216792..2217441 vapBC */AbrB-PIN
8 2 Gbem_1926 Gbem_1927 - 2228334..2228836 relBE or parDE */PHD-RelE
9 2 Gbem_2488 Gbem_2487 - 2880677..2881239 mazEF, ccd or relBE */RHH-MazF
10 2 Gbem_2788 Gbem_2787 - 3215362..3215980 relBE */Xre-RelE
11 2 Gbem_2978 Gbem_2977 - 3445621..3446693 -/HEPN-MNT

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Gbem_1828-60.94Gbem_1829HTH_XRE/HTH_XRE/HTH_3/HipB73.85NC_011146
2Gbem_1916-63.81Gbem_1915VapC/PIN71.94NC_011146
3Gbem_2142-60.06Gbem_2141HTH_472.02NC_011146
4Gbem_1918AbrB/SpoVT_AbrB84.88Gbem_1917PIN/COG184886.82NC_011146
5Gbem_2488CcdB89.13Gbem_2489-60.32NC_011146
6Gbem_1906VapI/HTH_XRE/HTH_XRE/HTH_3/HipB87.48Gbem_1907HigB/Plasmid_killer91.96NC_011146
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.