TADB
Salmonella enterica subsp. enterica serovar Paratyphi A str.

# GENOME INFO
Genome size (bp) : 4581797
Link to NCBI Taxonomy Browser by Tax_id :554290
 
# TA INFO in replicon: NC_011147
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SSPA2575 SSPA2574 - 2855786..2856591 -/RHH-GNAT
2 2 SSPA2703 SSPA2704 - 3008418..3009043 vapBC */AbrB-PIN
3 2 SSPA3114 SSPA3115 - 3422420..3423179 -/YhfG-Fic
4 2 SSPA3269 SSPA3270 - 3621033..3621793 -/RHH-GNAT
5 2 SSPA3490 SSPA3491 - 3886945..3887645 higBA (relBE) */COG5606-RelE
6 2 SSPA3601 SSPA3600 - 4013384..4014137 relBE */Xre-RelE
7 2 SSPA3604 SSPA3603 - 4015357..4015973 vapBC */RHH-PIN
8 2 SSPA3840 SSPA3839 - 4309521..4310302 -/RHH-GNAT
9 2 SSPA3948 SSPA3947 - 4416656..4417172 RelBE or parDE */RHH-RelE
10 2 SSPA4038 SSPA4039 - 4522577..4523153 -/RHH-COG2929

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SSPA0416HTH_XRE/HTH_XRE/HTH_383.25SSPA0417HTH_XRE/HTH_XRE84.07NC_011147
2SSPA3947RelB90.8SSPA3948RelE93.38NC_011147
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.