TADB
Salmonella enterica subsp. enterica serovar Agona str. SL483

# GENOME INFO
Genome size (bp) : 4798660
Link to NCBI Taxonomy Browser by Tax_id :454166
 
# TA INFO in replicon: NC_011149
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 SeAg_B1265 SeAg_B1264 - 1243060..1243787 relBE */Xre-RelE
2 2 SeAg_B1619 SeAg_B1618 - 1588348..1588870 relBE or parDE */PHD-RelE
3 2 SeAg_B3025 SeAg_B3024 - 2955771..2956576 -/RHH-GNAT
4 2 SeAg_B3667 SeAg_B3668 - 3536370..3537129 -/YhfG-Fic
5 2 SeAg_B4003 SeAg_B4004 - 3903306..3903972 relBE */Xre-RelE
6 2 SeAg_B4131 SeAg_B4132 - 4033457..4034112 higBA (relBE) */COG5606-RelE
7 2 SeAg_B4264 SeAg_B4263 - 4160363..4161117 relBE */Xre-RelE
8 2 SeAg_B4266 SeAg_B4268 - 4162530..4162952 relBE */Xre-RelE
9 2 SeAg_B4731 SeAg_B4732 - 4623765..4624408 vapBC */AbrB-PIN
10 2 SeAg_B4794 SeAg_B4793 - 4677412..4677962 mazEF, ccd or relBE */RHH-MazF
11 2 SeAg_B4814 SeAg_B4813 - 4692317..4693955 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1SeAg_B2091-62.68SeAg_B2092COG360973.2NC_011149
2SeAg_B1618StbD91.4SeAg_B1619RelE91.99NC_011149
3SeAg_B2557HTH_XRE/HTH_XRE/HTH_383.25SeAg_B2556HTH_XRE/HTH_XRE84.07NC_011149
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.