TADB
Vibrio fischeri MJ11 chromosome I, complete sequence. chromosome

# GENOME INFO
Genome size (bp) : 2905029
Link to NCBI Taxonomy Browser by Tax_id :388396
 
# TA INFO in replicon: NC_011184
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 VFMJ11_1428 VFMJ11_1427 - 1508970..1509655 relBE */Xre-RelE
2 2 VFMJ11_1565 VFMJ11_1564 - 1645857..1647442 hipBA */Xre-HipA
3 2 VFMJ11_2144 VFMJ11_2145 - 2276095..2277680 hipBA */Xre-HipA

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1VFMJ11_1539-60.94VFMJ11_1538HTH_XRE/HTH_3/HTH_XRE/HipB70.83NC_011184
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.