TADB
Aliivibrio salmonicida LFI1238 chromosome chromosome 1, complete chromosome

# GENOME INFO
Genome size (bp) : 3325165
Link to NCBI Taxonomy Browser by Tax_id :316275
 
# TA INFO in replicon: NC_011312
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 VSAL_I1283 VSAL_I1284 - 1393885..1394594 relBE */Xre-RelE
2 2 VSAL_I1469 VSAL_I1470 - 1585901..1586423 relBE/PHD-RelE

: TA pair identified by RASTA-Bacteria .
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1VSAL_I1645HTH_XRE/HTH_XRE/HTH_386.37VSAL_I1646RelE86.72NC_011312
2VSAL_I1470StbD91.17VSAL_I1469RelE93.38NC_011312
3VSAL_I1802HipA64.99VSAL_I1801HTH_XRE/HTH_XRE/HTH_3/HipB91.04NC_011312
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.