TADB
Escherichia coli IAI39 chromosome, complete genome. chromosome

# GENOME INFO
Genome size (bp) : 5132068
Link to NCBI Taxonomy Browser by Tax_id :585057
 
# TA INFO in replicon: NC_011750
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 ECIAI39_4243 ECIAI39_4244 - 4412784..4413618 yeeUV/-
- : unclassified

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1ECIAI39_3201PemK/MazF88.67ECIAI39_3202MazE/SpoVT_AbrB/VagC93.92NC_011750
2ECIAI39_4695PemK/MazF88.13ECIAI39_4694MazE/SpoVT_AbrB93.61NC_011750
3ECIAI39_0051CcdB90.03ECIAI39_0050CcdA/COG530293.22NC_011750
4ECIAI39_0269-62.42ECIAI39_0270ParE/Plasmid_stabil92.17NC_011750
5ECIAI39_0932COG360989.59ECIAI39_0931ParE/Plasmid_stabil91.27NC_011750
6ECIAI39_4922HTH_XRE/HTH_XRE/HTH_363.47ECIAI39_4923HTH_XRE/HTH_3/HTH_XRE90.99NC_011750
7ECIAI39_0270ParE/Plasmid_stabil92.17ECIAI39_0271COG360987.01NC_011750
8ECIAI39_2541HTH_XRE/HTH_XRE/HTH_382.13ECIAI39_2542HTH_XRE/HTH_XRE/HTH_3/HipB82.89NC_011750
9ECIAI39_0425-67.1ECIAI39_0424RelB80.58NC_011750
10ECIAI39_0951-62.74ECIAI39_0950HTH_XRE/HTH_XRE/HTH_3/VapI/HipB75.35NC_011750
11ECIAI39_4261-63.84ECIAI39_4262HTH_3/HTH_XRE/HTH_XRE/HipB74.22NC_011750
12ECIAI39_0813-60.97ECIAI39_0812HTH_XRE/HTH_XRE/HTH_3/HipB73.42NC_011750
13ECIAI39_3629-60.77ECIAI39_3628AbrB71.88NC_011750
14ECIAI39_1939-62.64ECIAI39_1940HTH_XRE/HTH_3/HTH_XRE71.36NC_011750
15ECIAI39_3517-66.68ECIAI39_3516HTH_XRE/HTH_3/HTH_XRE/HipB70.56NC_011750
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.