TADB
Variovorax paradoxus S110 chromosome 1, complete sequence. chromosome

# GENOME INFO
Genome size (bp) : 5626353
Link to NCBI Taxonomy Browser by Tax_id :543728
 
# TA INFO in replicon: NC_012791
#TypeToxinAntitoxinRegulatorLocationClassification(family/domain)
1 2 Vapar_2390 Vapar_2391 - 2552687..2553394 relBE */Xre-RelE

: TA pair identified by RASTA-Bacteria .
* : TA family predicted based on the TA domain pair using the relationship in Table S2

The further putative TA pairs predicted by RASTA-Bacteria .
#ToxinDomain1Score1AntitoxinDomain2Score2Replicon
1Vapar_4245MazE/SpoVT_AbrB88.54Vapar_4244Doc/DOC90.04NC_012791
2Vapar_2299-60.61Vapar_2300HTH_XRE/HTH_XRE/HTH_3/HipB73.31NC_012791
3Vapar_2698-61.55Vapar_2697HTH_XRE/HTH_XRE/HipB71.33NC_012791
4Vapar_2450-67.55Vapar_2451HTH_XRE/HTH_XRE/HTH_3/HipB70.89NC_012791
5Vapar_2245-60.16Vapar_2246HTH_3/HTH_XRE/HTH_XRE70.59NC_012791
6Vapar_3279HipA83.67Vapar_3278HTH_XRE/HTH_XRE/HTH_3/HipB85.66NC_012791
7Vapar_2873VapC/PIN/COG184886.82Vapar_2874StbD90.7NC_012791
8Vapar_2763COG4113/PIN83.63Vapar_2762Phd86.48NC_012791
Note: The RASTA-Bacteria algorithm utilises rpsblast search and typical characteristics of TA loci, such as a two-gene, co-directed module coding for small proteins, to identify TA hits. RASTA-Bacteria TA pair hits with one score >70% and the other > 60% were recorded by TADB, this strict cut-off yields broadly reliable TA candidates.