Last Update: June, 2017

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Number of references found for the 'Protein Structure' category : 52

(1) Loris R et al. (1999) Crystal structure of CcdB, a topoisomerase poison from E. coli. J Mol Biol. 285(4):1667-77.. [PudMed:9917404]
(2) Sterckx YG; Haesaerts S; Van Melderen L; Loris R (2014) Crystallization and preliminary X-ray analysis of two variants of the Escherichia coli O157 ParE2-PaaA2 toxin-antitoxin complex Acta Crystallogr F Struct Biol Commun 70(Pt 9):1284-91. [PudMed:25195911]
(3) Bibi-Triki S; Li de la Sierra-Gallay I; Lazar N; Leroy A; Van Tilbeurgh H; Sebbane F; Pradel E (2014) Functional and structural analysis of HicA3-HicB3, a novel toxin-antitoxin system of Yersinia pestis J Bacteriol 196(21):3712-23. [PudMed:25112480]
(4) Liang Y; Gao Z; Wang F; Zhang Y; Dong Y; Liu Q (2014) Structural and functional characterization of Escherichia coli toxin-antitoxin complex DinJ-YafQ J Biol Chem 289(30):21191-202. [PudMed:24923448]
(5) Sterckx YG; Volkov AN; Vranken WF; Kragelj J; Jensen MR; Buts L; Garcia-Pino A; Jove T; Van Melderen L; Blackledge M; van Nuland NA; Loris R (2014) Small-angle X-ray scattering- and nuclear magnetic resonance-derived conformational ensemble of the highly flexible antitoxin PaaA2 Structure 22(6):854-65. [PudMed:24768114]
(6) Zorzini V; Buts L; Sleutel M; Garcia-Pino A; Talavera A; Haesaerts S; De Greve H; Cheung A; van Nuland NA; Loris R (2014) Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics Nucleic Acids Res 42(10):6709-25. [PudMed:24748664]
(7) Im H; Jang SB; Pathak C; Yang YJ; Yoon HJ; Yu TK; Suh JY; Lee BJ (2014) Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 A resolution Protein Sci 23(6):819-32. [PudMed:24677509]
(8) Verma S; Kumar S; Gupta VP; Gourinath S; Bhatnagar S; Bhatnagar R (2014) Structural basis of Bacillus anthracis MoxXT disruption and the modulation of MoxT ribonuclease activity by rationally designed peptides J Biomol Struct Dyn 33(3):606-24. [PudMed:24650157]
(9) Schureck MA; Maehigashi T; Miles SJ; Marquez J; Cho SE; Erdman R; Dunham CM (2014) Structure of the Proteus vulgaris HigB-(HigA)2-HigB toxin-antitoxin complex J Biol Chem 289(2):1060-70. [PudMed:24257752]
(10) Das U; Kumar N; Gourinath S; Srinivasan A (2013) Preliminary crystallographic analysis of recombinant VapBC-15 toxin-antitoxin complex from Mycobacterium tuberculosis Acta Crystallogr Sect F Struct Biol Cryst Commun 69(Pt 11):1242-5. [PudMed:24192359]
(11) Mernik A; Andjelkovic U; Drobnak I; Lah J (2012) Differences in Unfolding Energetics of CcdB Toxins From V. fischeri and E. coli Acta Chim Slov 59(3):548-53. [PudMed:24061309]
(12) Pathak C; Im H; Yang YJ; Yoon HJ; Kim HM; Kwon AR; Lee BJ (2013) Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity Biochim Biophys Acta 1834(12):2579-90. [PudMed:24060809]
(13) Polom D; Boss L; Wegrzyn G; Hayes F; Kedzierska B (2013) Amino acid residues crucial for specificity of toxin-antitoxin interactions in the homologous Axe-Txe and YefM-YoeB complexes FEBS J 280(22):5906-18. [PudMed:24028219]
(14) Hadzi S; Garcia-Pino A; Martinez-Rodriguez S; Verschueren K; Christensen-Dalsgaard M; Gerdes K; Lah J; Loris R (2013) Crystallization of the HigBA2 toxin-antitoxin complex from Vibrio cholerae Acta Crystallogr Sect F Struct Biol Cryst Commun 69(Pt 9):1052-9. [PudMed:23989162]
(15) Xu K; Dedic E; Cob-Cantal P; Dienemann C; Boggild A; Winther KS; Gerdes K; Brodersen DE (2013) Protein expression, crystallization and preliminary X-ray crystallographic analysis of the isolated Shigella flexneri VapC toxin Acta Crystallogr Sect F Struct Biol Cryst Commun 69(Pt 7):762-5. [PudMed:23832203]
(16) De Gieter S; Loris R; van Nuland NA; Garcia-Pino A (2014) (1)H, (1)(3)C, and (1)(5)N backbone and side-chain chemical shift assignment of the toxin Doc in the unbound state Biomol NMR Assign 8(1):145-8. [PudMed:23420131]
(17) Samson JE; Spinelli S; Cambillau C; Moineau S (2013) Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type III toxin-antitoxin system Mol Microbiol 87(4):756-68. [PudMed:23279123]
(18) Min AB; Miallau L; Sawaya MR; Habel J; Cascio D; Eisenberg D (2012) The crystal structure of the Rv0301-Rv0300 VapBC-3 toxin-antitoxin complex from M. tuberculosis reveals a Mg(2)(+) ion in the active site and a putative RNA-binding site Protein Sci 21(11):1754-67. [PudMed:23011806]
(19) Boggild A; Sofos N; Andersen KR; Feddersen A; Easter AD; Passmore LA; Brodersen DE (2012) The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity Structure 20(10):1641-8. [PudMed:22981948]
(20) Zhang F; Xing L; Teng M; Li X (2012) Crystallization and preliminary crystallographic studies of the YafN-YafO complex from Escherichia coli Acta Crystallogr Sect F Struct Biol Cryst Commun 68(Pt 8):894-7. [PudMed:22869116]
(21) Sterckx YG; Garcia-Pino A; Haesaerts S; Jove T; Geerts L; Sakellaris V; Van Melderen L; Loris R (2012) The ParE2-PaaA2 toxin-antitoxin complex from Escherichia coli O157 forms a heterodocecamer in solution and in the crystal Acta Crystallogr Sect F Struct Biol Cryst Commun 68(Pt 6):724-9. [PudMed:22684081]
(22) Kwon AR; Kim JH; Park SJ; Lee KY; Min YH; Im H; Lee I; Lee KY; Lee BJ (2012) Structural and biochemical characterization of HP0315 from Helicobacter pylori as a VapD protein with an endoribonuclease activity Nucleic Acids Res 40(9):4216-28. [PudMed:22241770]
(23) Mate MJ; Vincentelli R; Foos N; Raoult D; Cambillau C; Ortiz-Lombardia M (2012) Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from Rickettsia felis Nucleic Acids Res 40(7):3245-58. [PudMed:22140099]
(24) Blower TR et al. (2011) A processed noncoding RNA regulates an altruistic bacterial antiviral system. Nat Struct Mol Biol. 18(2):185-90.. [PudMed:21240270]
(25) Brown BL et al. (2010) Preliminary crystallographic analysis of the Escherichia coli antitoxin MqsA (YgiT/b3021) in complex with mqsRA promoter DNA. Acta Crystallogr Sect F Struct Biol Cryst Commun. 66(Pt 9):1060-3. [PudMed:20823526]
(26) Arbing MA et al. (2010) Crystal structures of Phd-Doc, HigA, and YeeU establish multiple evolutionary links between microbial growth-regulating toxin-antitoxin systems. Structure 18(8):996-1010. [PudMed:20696400]
(27) Dalton KM et al. (2010) A conserved mode of protein recognition and binding in a ParD-ParE toxin-antitoxin complex. Biochemistry 49(10):2205-15. [PudMed:20143871]
(28) Garcia-Pino A et al. (2010) Purification and crystallization of Phd, the antitoxin of the phd/doc operon. Acta Crystallogr Sect F Struct Biol Cryst Commun 66(Pt 2):167-71 . [PudMed:20124714]
(29) Brown BL et al. (2009) Three dimensional structure of the MqsR:MqsA complex: a novel TA pair comprisedof a toxin homologous to RelE and an antitoxin with unique properties. PLoS Pathog. 5(12):e1000706. . [PudMed:20041169]
(30) Neubauer C et al. (2009) The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE. Cell. 139(6):1084-95.. [PudMed:20005802]
(31) De Jonge N et al. (2010) Structural and thermodynamic characterization of Vibrio fischeri CcdB. J Biol Chem 285(8):5606-13. [PudMed:19959472]
(32) Francuski D et al. (2009) Crystal structure of the antitoxin-toxin protein complex RelB-RelE fromMethanococcus jannaschii. J Mol Biol 393(4):898-908. [PudMed:19712680]
(33) Schumacher MA et al. (2009) Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB Science. 323(5912):396-401. [PudMed:19150849]
(34) Garcia-Pino A et al. (2008) Crystallization of Doc and the Phd-Doc toxin-antitoxin complex. Acta Crystallogr Sect F Struct Biol Cryst Commun 64(Pt 11):1034-8. [PudMed:18997335]
(35) Miallau L et al. (2009) Structure and proposed activity of a member of the VapBC family oftoxin-antitoxin systems. VapBC-5 from Mycobacterium tuberculosis. J Biol Chem 284(1):276-83. [PudMed:18952600]
(36) Kumar P et al. (2008) Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that itis not an intrinsically unstructured protein. J Mol Biol 383(3):482-93. [PudMed:18793646]
(37) Garcia-Pino A et al. (2008) Doc of prophage P1 is inhibited by its antitoxin partner Phd through foldcomplementation. J Biol Chem 283(45):30821-7. [PudMed:18757857]
(38) Lee S et al. (2008) Crystal structure of Escherichia coli MazG, the regulator of nutritional stressresponse. J Biol Chem 283(22):15232-40. [PudMed:18353782]
(39) Oberer M et al. (2007) The solution structure of ParD, the antidote of the ParDE toxin antitoxinmodule, provides the structural basis for DNA and toxin binding. Protein Sci 16(8):1676-88. [PudMed:17656583]
(40) Khoo SK et al. (2007) Molecular and structural characterization of the PezAT chromosomaltoxin-antitoxin system of the human pathogen Streptococcus pneumoniae. J Biol Chem 282(27):19606-18. [PudMed:17488720]
(41) De Jonge N et al. (2007) Purification and crystallization of Vibrio fischeri CcdB and its complexes withfragments of gyrase and CcdA. Acta Crystallogr Sect F Struct Biol Cryst Commun 63(Pt 4):356-60. [PudMed:17401216]
(42) Kamphuis MB et al. (2007) Structure and function of bacterial kid-kis and related toxin-antitoxin systems. Protein Pept Lett 14(2):113-24. [PudMed:17305597]
(43) Madl T et al. (2006) Structural basis for nucleic acid and toxin recognition of the bacterialantitoxin CcdA. J Mol Biol 364(2):170-85. [PudMed:17007877]
(44) Buts L et al. (2005) Crystallization of the C-terminal domain of the addiction antidote CcdA incomplex with its toxin CcdB. Acta Crystallogr Sect F Struct Biol Cryst Commun 61(Pt 10):949-52. [PudMed:16511204]
(45) Kamada K et al. (2005) Conformational change in the catalytic site of the ribonuclease YoeB toxin byYefM antitoxin. Mol Cell. 19(4):497-509. . [PudMed:16109374]
(46) Dao-Thi MH et al. (2005) Molecular basis of gyrase poisoning by the addiction toxin CcdB. J Mol Biol 348(5):1091-102. [PudMed:15854646]
(47) Takagi H et al. (2005) Crystal structure of archaeal toxin-antitoxin RelE-RelB complex withimplications for toxin activity and antitoxin effects. Nat Struct Mol Biol. 12(4):327-31. [PudMed:15768033]
(48) Dao-Thi MH et al. (2004) Crystallization of CcdB in complex with a GyrA fragment. Acta Crystallogr D Biol Crystallogr 60(Pt 6):1132-421. . [PudMed:15159578]
(49) Kamada K et al. (2003) Crystal structure of the MazE/MazF complex: molecular bases of antidote-toxinrecognition. Mol Cell 11(4):875-84. [PudMed:12718874]
(50) Lah J et al. (2003) Recognition of the intrinsically flexible addiction antidote MazE by a dromedarysingle domain antibody fragment. Structure, thermodynamics of binding,stability, and influence on interactions with DNA. J Biol Chem 278(16):14101-11. [PudMed:12533537]
(51) Hargreaves D et al. (2002) Structural and functional analysis of the kid toxin protein from E. coli plasmidR1. Structure 10(10):1425-33. [PudMed:12377128]
(52) Meinhart A et al. (2001) Crystallization and preliminary X-ray diffraction studies of the epsilonzetaaddiction system encoded by Streptococcus pyogenes plasmid pSM19035. Acta Crystallogr D Biol Crystallogr 57(Pt 5):745-724. . [PudMed:11320325]